Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8K440 | Abca8b | ABC-type organic anion transporter ABCA8B … | Mus musculus (Mouse) | 1620 aa |
Protein Details: Q8K440 (Abca8b)
Protein Information
| Accession | Q8K440 |
|---|---|
| Protein Names | ABC-type organic anion transporter ABCA8B (EC 7.6.2.-) (ATP-binding cassette sub-family A member 8B) |
| Gene Symbol | Abca8b |
| Organism | Mus musculus (Mouse) |
| Length | 1620 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MIKREISVRQ11QTCALLQKNL21LKKWRLKRES31LMEWVSSLLL41LLFLYWYPHG
51-10051HGATDLSSVP61TKDLGRVDSF71RQSGFMIGYT81PVTSMTQQIM91EKVAATPFMA
101-150101DKKVLGLLDE111ENIKELTESH121AEIIRVIFSD131TFSYHLKFQF141DQRIPTSREL
151-200151RDHNAHCDGL161YEDVNCLIAI171FWKEGFVALQ181AAINAAIIET191TTNHSVMEEL
201-250201LSVSGKFMKI211HPFVRQEGIL221TDFFIFTCII231SFSPITYYVS241INVARERKRM
251-300251KGLMMMMGLR261DPAFWLSWGL271LYAGFVFIMA281LSLALVIKSV291QFFILTSFMV
301-350301VFSLFLLYGL311SMITLAFLMS321ALVRKSVLTG331LSVFLLTIFW341GSLGFTSLYR
351-400351YLPAPVEWTL361SLFSPFAFTL371GMAQLLRVDY381DLNSNAPPDP391ASGSNLIIAT
401-450401NFMLVFDAFL411YLALMMYFEK421VLPNEYGHQH431SPLFFLKSSF441WLQTRKPAHV
451-500451ILEDGIDPVP461SSGDSFEPVS471PEFHGKESIR481IRNISKEYKG491KPNKIEALKD
501-550501LTLDIYEGQI511TAVLGHSGAG521KSTLLNILSG531LSVPTKGSVT541IYNNNLSEMA
551-600551DLENILRIAG561VCPQANVQFD571FLTVRENLRL581FAKIRGIPPQ591DVEKEVQRVL
601-650601LELEMKNIQN611ILAQNLSGGQ621KRKLTFGIAI631LGDSQIFLLD641EPTAGLDPFS
651-700651RHRVWNLLKE661RRADRVVLFS671TQFMDEADIL681ADRKVFISNG691RLKCAGSSLF
701-750701LKKKWGVGYH711LSLQLKEVCV721PENITSLVKQ731HIPAAKLSAE741GEGKLLYTLP
751-800751LETTYRFPEL761CQSLDSCPGL771GIENYGVSMT781TLNEVFLKLE791GKASIDEPEV
801-850801DIVGEGQTER811SGDTERLMEM821EQTLSSLRET831EKTDGMALWR841QQTCAIAKVR
851-900851LLKLKHERKT861LLSVLLILVV871GICPFLFENI881STKIRQSSYT891WELSPHDYFL
901-950901APGQQPQGML911TQLLIINKTE921ASIDDFIHSV931ERQNIALEVD941ASGTRDGTDD
951-1000951PSYNGALIVS961GNEKNHSFSF971ACNTKRLNCF981PVLMDILSNG991LLGMVKPSAR
1001-10501001IQTDRSTYLM1011DETIHPLEDL1021WKTAFWLILT1031SACPPYIAMS1041SVTDYKNRAW
1051-11001051FQLRVSGLFP1061SAYWVGQAMV1071DIPLYCFVFL1081FMSLMDYLFR1091FPDTMFSIIS
1101-11501101HVIQIPCSVG1111YAISLIFLTY1121VISFISRKGK1131KNSGIWSLSF1141YIITVFSVAV
1151-12001151ILLAFDVDGT1161QYYIIFLIPP1171STLVGCLILS1181LHLFIGQIFE1191EGQVIEPFLV
1201-12501201FLIPFLHVFI1211FIFTLRCLEW1221KFGKKTMRKD1231PIFRISPRNN1241DVYQNPEEPE
1251-13001251DEDEDVQMER1261MRTANALVST1271SFDEKPVIIA1281SCLRKEYAGK1291QKHCLSKKKA
1301-13501301KIATRNVSFC1311VRKGEILGLL1321GHNGAGKSTS1331LKMISGDTKV1341TAGQVLLKGS
1351-14001351REGDTPGFLG1361YCPQENALWP1371NLTVKEHLEI1381FAAVRGLRKS1391HAAVAITRLA
1401-14501401DALKLQDQLK1411SPVKTLSEGV1421KRKLCFVLSI1431LGNPSILLLD1441EPSTGLDPEG
1451-15001451QQQIWQAIRA1461IIKNTDRGAL1471LTTHYMAEAE1481ALCDRVAILV1491SGRLRCIGSI
1501-15501501QHLKSKFGKD1511YLLEMKVKTL1521EQVEPLNTEI1531LRLFPQASRQ1541ERYSSLMAYK
1551-16001551LPVEAVQPLS1561QAFFKLEKVK1571QTFDLEEYSL1581SQSTLEQVFL1591ELSKEQELDG
1601-16201601LELEELDSSI1611KWKLLPQEEA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 13 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
GPS-Palm: 0.96
Deep-Palm: 0.96
|
| 157 | - | - | - |
Deep-Palm: 0.20
|
|
| 166 | - | - | - |
Deep-Palm: 0.13
|
|
| 228 | - | - | - |
Deep-Palm: 0.07
|
|
| 562 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.91
|
| 694 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.97
|
|
| 719 | - | - | - |
Deep-Palm: 0.89
|
|
| 761 | - | - | - |
Deep-Palm: 0.93
|
|
| 767 | - | - | - |
Deep-Palm: 0.88
|
|
| 844 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.97
|
|
| 873 | - | - | - |
Deep-Palm: 0.98
|
|
| 972 | - | - | - |
Deep-Palm: 0.34
|
|
| 979 | - | - | - |
Deep-Palm: 0.40
|
|
| 1033 | - | - | - |
Deep-Palm: 0.40
|
|
| 1076 | - | - | - |
Deep-Palm: 0.05
|
|
| 1107 | - | - | - |
Deep-Palm: 0.14
|
|
| 1176 | - | - | - |
Deep-Palm: 0.57
|
|
| 1217 | - | - | - |
Deep-Palm: 0.77
|
|
| 1282 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
GPS-Palm: 0.96
Deep-Palm: 0.89
|
| 1294 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.92
|
|
| 1310 | - | - | - |
Deep-Palm: 0.98
|
|
| 1362 | - | - | - |
Deep-Palm: 0.88
|
|
| 1425 | - | - | - |
Deep-Palm: 0.98
|
|
| 1483 | - | - | - |
Deep-Palm: 0.98
|
|
| 1496 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Liver
Specificity: 1.000
6/6 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.