Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8K442 | Abca8a | ABC-type organic anion transporter ABCA8A … | Mus musculus (Mouse) | 1620 aa |
Protein Details: Q8K442 (Abca8a)
Protein Information
| Accession | Q8K442 |
|---|---|
| Protein Names | ABC-type organic anion transporter ABCA8A (EC 7.6.2.-) (ATP-binding cassette sub-family A member 8A) |
| Gene Symbol | Abca8a |
| Organism | Mus musculus (Mouse) |
| Length | 1620 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVKREINVCQ11QTWALLCKNL21LRKKRLKRDT31FLEFLYTALI41LLSLILFLQL
51-10051HEVYDFSSLP61DVDLGRIDSF71NDSTFMIVYT81PITPTTQRIM91DRVSLVSYMT
101-150101GRKILASPNE111ENMTELISMR121FSDVVGVIFT131NAYSYNLKFI141KGARIPTIKE
151-200151HQDHTAHCHS161YGEIIYCGLS171EFWRDGFVAL181QAAINAAIIE191VTTNHSVMEE
201-250201MMSLTGKYIK211IDSFVGQEGT221TTDCFLFFCI231IRFSPLTYYI241SAGVTRERKK
251-300251MKGLMAVMGL261RDSAFWLSWG271LLYGVIVFVV281TLLSTTIVKL291VQFVFLTGFM
301-350301VIFSLFFFYG311LSLISLSFLM321SVLLKKSFLT331DLVVFLLTVS341CGSLGFTALY
351-400351RYLPVSLEWL361LSLLSPFAFM371LGMVQLLRLD381YDVNSNADPM391GNPNEVIGTI
401-450401FMLFFDGVFY411LLLTFYFEKV421LPSKSFHDKT431YWHACKSHFF441LIDYSFYIRT
451-500451ALDNETDYEF461SDDSFEPVSM471EFHGKEAIRI481RNLTKDYIQK491SKRTEALKDL
501-550501TLDVYKGQIT511AILGHSGAGK521STLLNVLSGL531CVPTKGWVTI541HNNKLSEMTD
551-600551LENISKLTGV561CPQCNVQFDF571LTVRENLRLF581AKIKGIQAHE591VDNEVQRVLL
601-650601ELDMKNTQNI611LVQNLSGGQK621RKLTFGIAIL631GDPQIFLLDE641PTAGLDPFSR
651-700651HRVWNFLKER661RADRVVLFST671QFMDEADILA681DRKVFISKGK691LKCAGSSLFL
701-750701KKKWGIGYHL711SLQLSETCVH721ERITSLVKQH731IPDSKLSAES741EGKLSYILPL
751-800751ERTNKFPDLY761RDLERSPDLG771IENYGVSITT781LTEVFLKLEG791KSSIDQSDIG
801-850801MTEDVQAGGA811RSPERFAEVE821QLVSLLNGRC831KMKGGMALWW841QQLCAVTRLR
851-900851FLKLKHERKS861IVILILVLGI871GLLHILSANI881YRMVRQSDYC891WELAPHMYFL
901-950901TPGQQPQPPL911TNLLIVNKTG921AKIDDFIHSL931EQQNIALEVD941AFGTRNGTED
951-1000951SQYNGAIILS961GDEKNYNFTL971ACNTKRLNCF981PVLVDIVSNG991LLGLFAPSAH
1001-10501001IQTDRSTFPE1011ENDHRKFDYL1021AYFFLWVLLM1031ACVPPYISMT1041SIDDYKNRAQ
1051-11001051FQLWISGLSP1061SAYWFGQALF1071EVPVYCALIL1081SIFIAFYASA1091PPESKFTVGD
1101-11501101LFIQILYVGG1111YAMSVIFMTY1121VISFIYRKGR1131KNSGLWSLCF1141YIVSFFSMCF
1151-12001151MLIDYFRDIS1161LFVLIALVPP1171ATLGGCTLLH1181FENREFSEII1191FEPEREYSYL
1201-12501201FFLAPLLHFA1211IFVVILRCME1221RKFGMKTMRT1231DPVFRISPRS1241DRVFNNPEDP
1251-13001251DGEDEDVSQE1261RVWTANALTS1271ADFQEKPAII1281ASCLRKEYKG1291KKKCFVLKSK
1301-13501301KKIATRNISF1311CVRKGEVVGL1321LGHNGAGKST1331SIKMITGETK1341PSAGQVLLKG
1351-14001351SSTGDTPGFL1361GYCPQENALW1371LNLTVREHLE1381IFAAIKGMRK1391SDANVAIERL
1401-14501401ADALKLQDQL1411KSPVKTLSEG1421VKRKLCFVLS1431ILGNPSVVLL1441DEPSTGMDPE
1451-15001451GQQQMWQAIQ1461ATFSNTERGA1471LLTTHYMAEA1481EAVCDRVAIM1491VSGRLRCIGS
1501-15501501IQHLKSKFGK1511EYLLEMKVKT1521PSQVEPLNTE1531IMRLFPQAAR1541QERYSSLMVY
1551-16001551KLPREDVQPL1561SQAFFKLETV1571KQSFDLEEYS1581LSQSTLEQVF1591LELSKEQELD
1601-16201601GFEEELDPSV1611KWKLLPQEEA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 9 | - | - | - |
Deep-Palm: 0.11
|
|
| 17 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.97
|
|
| 158 | - | - | - |
Deep-Palm: 0.05
|
|
| 167 | - | - | - |
Deep-Palm: 0.05
|
|
| 224 | - | - | - |
Deep-Palm: 0.23
|
|
| 229 | - | - | - |
Deep-Palm: 0.34
|
|
| 341 | - | - | - |
Deep-Palm: 0.93
|
|
| 435 | - | - | - |
Deep-Palm: 0.10
|
|
| 531 | - | - | - |
Deep-Palm: 0.98
|
|
| 561 | - | - | - |
Deep-Palm: 0.14
|
|
| 564 | - | - | - |
Deep-Palm: 0.45
|
|
| 693 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
GPS-Palm: 0.95
Deep-Palm: 0.97
|
| 718 | - | - | - |
Deep-Palm: 0.62
|
|
| 830 | - | - | - |
Deep-Palm: 0.95
|
|
| 844 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.95
|
|
| 890 | - | - | - |
Deep-Palm: 0.18
|
|
| 972 | - | - | - |
Deep-Palm: 0.68
|
|
| 979 | - | - | - |
Deep-Palm: 0.77
|
|
| 1032 | - | - | - |
Deep-Palm: 0.05
|
|
| 1076 | - | - | - |
Deep-Palm: 0.31
|
|
| 1139 | - | - | - |
Deep-Palm: 0.09
|
|
| 1149 | - | - | - |
Deep-Palm: 0.03
|
|
| 1176 | - | - | - |
Deep-Palm: 0.95
|
|
| 1218 | - | - | - |
Deep-Palm: 0.93
|
|
| 1283 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.94
|
|
| 1294 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.94
|
|
| 1311 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.98
|
|
| 1363 | - | - | - |
Deep-Palm: 0.91
|
|
| 1426 | - | - | - |
Deep-Palm: 0.98
|
|
| 1484 | - | - | - |
Deep-Palm: 0.97
|
|
| 1497 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Liver
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.