Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8N4C7 | STX19 | Syntaxin-19 | Homo sapiens (Human) | 294 aa |
Protein Details: Q8N4C7 (STX19)
Protein Information
| Accession | Q8N4C7 |
|---|---|
| Protein Names | Syntaxin-19 |
| Gene Symbol | STX19 |
| Organism | Homo sapiens (Human) |
| Length | 294 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MKDRLQELKQ11RTKEIELSRD21SHVSTTETEE31QGVFLQQAVI41YEREPVAERH
51-10051LHEIQKLQES61INNLADNVQK71FGQQQKSLVA81SMRRFSLLKR91ESTITKEIKI
101-150101QAEYINRSLN111DLVKEVKKSE121VENGPSSVVT131RILKSQHAAM141FRHFQQIMFI
151-200151YNDTIAAKQE161KCKTFILRQL171EVAGKEMSEE181DVNDMLHQGK191WEVFNESLLT
201-250201EINITKAQLS211EIEQRHKELV221NLENQIKDLR231DLFIQISLLV241EEQGESINNI
251-294251EMTVNSTKEY261VNNTKEKFGL271AVKYKKRNPC281RVLCCWCCPC291CSSK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 162 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.66
|
|
| 280 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.35
|
|
| 284 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.02
|
| 285 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.02
|
| 287 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.01
|
| 288 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.01
|
| 290 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.98
Deep-Palm: 0.02
|
| 291 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.98
Deep-Palm: 0.01
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
LNCaP
Specificity: 1.000
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 168 | R → C | 0.003774 | SNP | Missense Mutation | UCEC |
| 178 | S → C | 0.010870 | SNP | Missense Mutation | ACC |