Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8N8A6 | DDX51 | ATP-dependent RNA helicase DDX51 (EC … | Homo sapiens (Human) | 666 aa |
Protein Details: Q8N8A6 (DDX51)
Protein Information
| Accession | Q8N8A6 |
|---|---|
| Protein Names | ATP-dependent RNA helicase DDX51 (EC 3.6.4.13) (DEAD box protein 51) |
| Gene Symbol | DDX51 |
| Organism | Homo sapiens (Human) |
| Length | 666 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 31382980 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MALFYVARYP11GPDAAAAAGP21EGAEAGAHGR31ARALLERLQS41RARERQQQRE
51-10051PAQTEAAAST61EPATRRRRRP71RRRRRVNDAE81PGSPEAPQGK91RRKADGEDAG
101-150101AESNEEAPGE111PSAGSSEEAP121GEPSAGSSEE131APGERSTSAS141AEAAPDGPAL
151-200151EEAAGPLVPG161LVLGGFGKRK171APKVQPFLPR181WLAEPNCVRR191NVTEDLVPIE
201-250201DIPDVHPDLQ211KQLRAHGISS221YFPVQAAVIP231ALLESAACGF241LVGRGGYRPS
251-300251DLCVSAPTGS261GKTLAFVIPV271VQALLSRVVC281HIRALVVLPT291KELAQQVSKV
301-350301FNIYTDATPL311RVSLVTGQKS321LAKEQESLVQ331KTADGYRCLA341DIVVATPGRL
351-400351VDHIDQTPGF361SLQQLRFLII371DEADRMIDSM381HQSWLPRVVA391AAFQSEDPAD
401-450401PCALLQRRQA411QAVTAASTCC421PQMPLQKLLF431SATLTQNPEK441LQQLGLHQPR
451-500451LFSTGLAHRG461LEDTDGDGDS471GKYAFPVGLT481HHYVPCSLSS491KPLVVLHLVL
501-550501EMGFSRVLCF511TNSRENSHRL521FLLVQAFGGV531DVAEFSSRYG541PGQRRMILKQ
551-600551FEQGKIQLLI561STDATARGID571VQGVELVVNY581DAPQYLRTYV591HRVGRTARAG
601-650601KTGQAFTLLL611KVQERRFLRM621LTEAGAPELQ631RHELSSKLLQ641PLVPRYEEAL
651-666651SQLEESVKEE661RKQRAA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 187 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.93
|
|
| 238 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.97
|
|
| 253 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.96
|
|
| 280 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.97
|
|
| 338 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.95
|
|
| 402 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.97
|
|
| 419 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.97
|
|
| 420 | - |
HeLa
(37611173)
| - |
GPS-Palm: 0.87
Deep-Palm: 0.96
|
|
| 486 | - | - | - |
Deep-Palm: 0.97
|
|
| 509 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.67
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
LNCaP
Specificity: 0.667
2/2 (100.0%)
1
U937 cell
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 187 | C → C | 0.001887 | SNP | Silent | UCEC |
| 217 | G → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 280 | C → C | 0.001887 | SNP | Silent | UCEC |
| 337 | R → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 538 | R → C | 0.003774 | SNP | Missense Mutation | UCEC |
| 551 | F → C | 0.002506 | SNP | Missense Mutation | COAD |
| 598 | R → C | 0.002288 | SNP | Missense Mutation | STAD |