Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8ND76-2 | CCNY | Cyclin-Y (Cyc-Y) (Cyclin box protein … | Homo sapiens (Human) | 316 aa |
Protein Details: Q8ND76-2 (CCNY)
Protein Information
| Accession | Q8ND76-2 |
|---|---|
| Protein Names | Cyclin-Y (Cyc-Y) (Cyclin box protein 1) (Cyclin fold protein 1) (cyclin-X) |
| Gene Symbol | CCNY |
| Organism | Homo sapiens (Human) |
| Length | 316 aa |
| Isoforms | |
| Related PMIDs | 31251020 32651440 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGNTTSCCVS11SSPKLRRNAH21SRLESYRPDT31DLSREDTGCN41LQHISDRENI
51-10051DVREKRKSLF61INHHPPGQIA71RKYSSCSTIF81LDDSTVSQPN91LKYTIKCVAL
101-150101AIYYHIKNRD111PDGRMLLDIF121DENLHPLSKS131EVPPDYDKHN141PEQKQIYRFV
151-200151RTLFSAAQLT161AECAIVTLVY171LERLLTYAEI181DICPANWKRI191VLGAILLASK
201-250201VWDDQAVWNV211DYCQILKDIT221VEDMNELERQ231FLELLQFNIN241VPSSVYAKYY
251-300251FDLRSLAEAN261NLSFPLEPLS271RERAHKLEAI281SRLCEDKYKD291LRRSARKRSA
301-316301SADNLTLPRW311SPAIIS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.02
|
|
| 8 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.03
|
|
| 39 | - | - | - |
Deep-Palm: 0.69
|
|
| 101 | - | - | - |
Deep-Palm: 0.32
|
|
| 122 | - | - | - |
Deep-Palm: 0.15
|
|
| 188 | - | - | - |
Deep-Palm: 0.96
|
|
| 208 | - | - | - |
Deep-Palm: 0.81
|
|
| 238 | - | - | - |
Deep-Palm: 0.16
|
|
| 309 | - | - | - |
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.800
4
LNCaP
Specificity: 0.800
4/4 (100.0%)
1
Jurkat T cell
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 271 | Y → C | 0.002288 | SNP | Missense Mutation | STAD |