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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
Q8NE91 TM4SF1 TM4SF1 protein Homo sapiens (Human) 232 aa

Protein Details: Q8NE91 (TM4SF1)

Protein Information
AccessionQ8NE91
Protein NamesTM4SF1 protein
Gene SymbolTM4SF1
OrganismHomo sapiens (Human)
Length232 aa
IsoformsNo isoforms
Related PMIDs No related PMIDs
Database SourcesdbPTMSwissPalm
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501MCYGKCARCI11GHSLVGLALL21CIAANILLYF31PNGETKYASE41NHLSRFVWFF
51-10051SGIVGGGLLM61LLPAFVFIGL71EQDDCCGCCG81HENCGKRCAM91LSSVLAALIG
101-150101IAGSGYCVIV111AALGLAEGPL121CLDSLGQWNY131TFASTEGQYL141LDTSTWSECT
151-200151EPKHIVEWNV161SLFSILLALG171GIEFILCLIQ181VINGVLGGIC191GFCCSHQQQM
201-232201TAKRTNPGQS211HNLPLFHCNL221YISLVFICKT231LY
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
2 - - -
GPS-Palm: 0.96
Deep-Palm: 0.01
6 DBPTM SWISSPALM L6 membrane L6 membrane protein
HeLa (29575903)
-
GPS-Palm: 0.87
Deep-Palm: 0.02
9 DBPTM SWISSPALM L6 membrane L6 membrane protein
HeLa (29575903)
-
Deep-Palm: 0.04
21 L6 membrane - -
Deep-Palm: 0.94
75 - - -
Deep-Palm: 0.12
76 - - -
Deep-Palm: 0.40
78 - - -
GPS-Palm: 0.66
Deep-Palm: 0.09
79 - - -
Deep-Palm: 0.10
84 - - -
Deep-Palm: 0.40
88 - - -
Deep-Palm: 0.67
107 DBPTM SWISSPALM L6 membrane protein - -
GPS-Palm: 0.74
Deep-Palm: 0.97
121 DBPTM SWISSPALM L6 membrane protein
HeLa (29575903)
-
Deep-Palm: 0.96
149 DBPTM SWISSPALM L6 membrane protein
HeLa (29575903)
-
Deep-Palm: 0.45
177 - - -
Deep-Palm: 0.97
190 - - -
GPS-Palm: 0.79
Deep-Palm: 0.53
193 - - -
GPS-Palm: 0.68
Deep-Palm: 0.18
194 - - -
GPS-Palm: 0.76
Deep-Palm: 0.10
218 - - -
Deep-Palm: 0.19
228 - - -
GPS-Palm: 0.96
Deep-Palm: 0.02
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
21 C → F 0.002506 SNP Missense Mutation COAD
21 C → S 0.002294 SNP Missense Mutation OV
29 Y → C 0.001887 SNP Missense Mutation UCEC
77 G → C 0.001887 SNP Missense Mutation UCEC
84 C → G 0.001764 SNP Missense Mutation LUAD
84 C → Wfs*39 0.004219 DEL Frame Shift Del SARC
107 C → S 0.001764 SNP Missense Mutation LUAD
? ? → ? 0.001887 SNP Missense Mutation UCEC