Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8NHG7 | SVIP | Small VCP/p97-interacting protein | Homo sapiens (Human) | 77 aa |
Protein Details: Q8NHG7 (SVIP)
Protein Information
| Accession | Q8NHG7 |
|---|---|
| Protein Names | Small VCP/p97-interacting protein |
| Gene Symbol | SVIP |
| Organism | Homo sapiens (Human) |
| Length | 77 aa |
| Isoforms | No isoforms |
| Related PMIDs | 22496122 25914232 26111759 29733200 31251020 32651440 32944167 36430497 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGLCFPCPGE11SAPPTPDLEE21KRAKLAEAAE31RRQKEAASRG41ILDVQSVQEK
51-7751RKKKEKIEKQ61IATSGPPPEG71GLRWTVS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 4 | Small VCP/p97-interacting protein, metazoa | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.03
|
|
| 7 | Small VCP/p97-interacting protein, metazoa Small VCP/p97-interacting protein | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.250
5
Jurkat T cell
Specificity: 0.250
5/5 (100.0%)
4
cerebral cortex
Specificity: 0.200
4/4 (100.0%)
3
LNCaP
Specificity: 0.150
3/3 (100.0%)
3
PC3
Specificity: 0.150
3/3 (100.0%)
3
CEM 174 cell
Specificity: 0.150
3/3 (100.0%)
1
HAP1 cell
Specificity: 0.050
1/1 (100.0%)
1
EC cell
Specificity: 0.050
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.