Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8R081 | Hnrnpl | Heterogeneous nuclear ribonucleoprotein L (hnRNP … | Mus musculus (Mouse) | 586 aa |
Protein Details: Q8R081 (Hnrnpl)
Protein Information
| Accession | Q8R081 |
|---|---|
| Protein Names | Heterogeneous nuclear ribonucleoprotein L (hnRNP L) |
| Gene Symbol | Hnrnpl |
| Organism | Mus musculus (Mouse) |
| Length | 586 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSRRLLPRAE11KRRRRLEQRQ21QPDEQLRRAG31AMVKMAAAGG41GGGGGRYYGG
51-10051GNEGGRAPKR61LKTENAGDQH71GGGGGGGSGA81AGGGGGENYD91DPHKTPASPV
101-150101VHIRGLIDGV111VEADLVEALQ121EFGPISYVVV131MPKKRQALVE141FEDVLGACNA
151-200151VNYAADNQIY161IAGHPAFVNY171STSQKISRPG181DSDDSRSVNS191VLLFTILNPI
201-250201YSITTDVLYT211ICNPCGPVQR221IVIFRKNGVQ231AMVEFDSVQS241AQRAKASLNG
251-300251ADIYSGCCTL261KIEYAKPTRL271NVFKNDQDTW281DYTNPNLSGQ291GDPGSNPNKR
301-350301QRQPPLLGDH311PAEYGGPHGG321YHSHYHDEGY331GPPPPHYEGR341RMGPPVGGHR
351-400351RGPSRYGPQY361GHPPPPPPPP371DYGPHADSPV381LMVYGLDQSK391MNCDRVFNVF
401-450401CLYGNVEKVK411FMKSKPGAAM421VEMADGYAVD431RAITHLNNNF441MFGQKMNVCV
451-500451SKQPAIMPGQ461SYGLEDGSCS471YKDFSESRNN481RFSTPEQAAK491NRIQHPSNVL
501-550501HFFNAPLEVT511EENFFEICDE521LGVKRPTSVK531VFSGKSERSS541SGLLEWDSKS
551-586551DALETLGFLN561HYQMKNPNGP571YPYTLKLCFS581TAQHAS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 148 | - | - | - |
Deep-Palm: 0.84
|
|
| 212 | - | - | - |
Deep-Palm: 0.25
|
|
| 215 | - | - | - |
Deep-Palm: 0.44
|
|
| 257 | - |
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.96
|
|
| 258 | - |
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.96
|
|
| 393 | - | - | - |
Deep-Palm: 0.44
|
|
| 401 | SWISSPALM DBPTM CYSMODDB | RNA recognition motif. (a.k.a. RRM RBD or RNP domain) |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.41
|
| 449 | - | - | - |
Deep-Palm: 0.05
|
|
| 469 | - | - | - |
Deep-Palm: 0.61
|
|
| 518 | - | - | - |
Deep-Palm: 0.84
|
|
| 578 | SWISSPALM DBPTM CYSMODDB | RRM domain |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.857
6
Liver
Specificity: 0.462
6/6 (100.0%)
1
Brain
Specificity: 0.077
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Brain tissue (Mass)
Specificity: 0.462
6/56 (10.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.