Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8R0I4 | Tm2d2 | TM2 domain-containing protein 2 | Mus musculus (Mouse) | 213 aa |
Protein Details: Q8R0I4 (Tm2d2)
Protein Information
| Accession | Q8R0I4 |
|---|---|
| Protein Names | TM2 domain-containing protein 2 |
| Gene Symbol | Tm2d2 |
| Organism | Mus musculus (Mouse) |
| Length | 213 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 31772009 34200797 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVLGGCPVSY11LLLCGQAALL21LGNLLLLHCV31SRSHSFNATA41ELDLTPSGAA
51-10051HLEGPAASSW61EYSDPNSPVI71LCSYLPDEFV81DCDAPVDHVG91NATASQELGY
101-150101GCLKFGGQAY111SDVQHTAVQC121RALEGIECAS131PRTFLRENKP141CIKYTGHYFI
151-200151TTLLYSFFLG161CFGVDRFCLG171HTGTAVGKLL181TLGGLGIWWF191VDLILLITGG
201-213201LMPSDGSNWC211TVY
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 6 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.09
|
|
| 14 | - | - | - |
Deep-Palm: 0.98
|
|
| 29 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.98
|
|
| 72 | - | - | - |
Deep-Palm: 0.20
|
|
| 82 | - | - | - |
Deep-Palm: 0.21
|
|
| 102 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.79
|
|
| 120 | - |
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.67
|
|
| 128 | - |
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.84
Deep-Palm: 0.77
|
|
| 141 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.43
|
|
| 161 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.83
|
|
| 168 | SWISSPALM DBPTM CYSMODDB | TM2 domain |
Forebrain
(28680068)
| - |
GPS-Palm: 0.83
Deep-Palm: 0.98
|
| 210 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.333
2
Testis
Specificity: 0.143
2/2 (100.0%)
1
Raw 264.7
Specificity: 0.071
1/1 (100.0%)
1
NSC
Specificity: 0.071
1/1 (100.0%)
1
Brain
Specificity: 0.071
1/1 (100.0%)
1
Liver
Specificity: 0.071
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
8
Brain tissue (Mass)
Specificity: 0.571
8/56 (14.3%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.