Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8R127 | Sccpdh | Saccharopine dehydrogenase-like oxidoreductase (EC 1.-.-.-) | Mus musculus (Mouse) | 429 aa |
Protein Details: Q8R127 (Sccpdh)
Protein Information
| Accession | Q8R127 |
|---|---|
| Protein Names | Saccharopine dehydrogenase-like oxidoreductase (EC 1.-.-.-) |
| Gene Symbol | Sccpdh |
| Organism | Mus musculus (Mouse) |
| Length | 429 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31311849 34200797 35358180 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MATEQRPFHL11VVFGASGFTG21QFVTEEVARE31QIASEQSSRL41PWAVAGRSKE
51-10051KLQQVLEKAA61QKLGRPSLSS71EVGVIICDIS81NPASLDEMAK91QAKLVLNCVG
101-150101PYRFYGEPVV111KACIENGTSC121IDICGEPQFL131ELMHAKYHEK141AAEKGVYIIG
151-200151SSGFDSIPAD161LGVLYTRNQM171NGTLTAVESF181LTINTGPEGL191CIHDGTWKSA
201-250201IYGFGDKGSL211RKLRSVSCLK221PVPIVGTKLK231RRWPVSYCRE241LNSYSIPFLG
251-300251SDISVVKRTQ261RYLHENLEDS271PVQYAAYVTV281GGITSVIKLM291FAGLFFLFFV
301-350301KFSIGRQLLI311KFPWLFSFGY321FSKQGPTQKQ331MDETSFTMTF341FGQGYSHGTC
351-400351VEKNKPNIRI361CTQVKGPEAG371YVATPIAMVQ381AAMTFLSDAS391DLPKGGGVFT
401-429401PGAAFSRTKL411IDRLNKHGIE421FSVISSSEV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 77 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.98
|
|
| 98 | Saccharopine dehydrogenase NADP binding domain |
Brain
(34200797)
|
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.94
|
|
| 113 | - | - | - |
Deep-Palm: 0.68
|
|
| 120 | - | - | - |
Deep-Palm: 0.77
|
|
| 124 | SWISSPALM DBPTM CYSMODDB | Saccharopine dehydrogenase NADP binding domain |
Forebrain
(28680068)
| - |
Deep-Palm: 0.43
|
| 191 | - | - | - |
Deep-Palm: 0.69
|
|
| 218 | SWISSPALM DBPTM CYSMODDB | - |
Brain
(31311849)
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.95
Deep-Palm: 0.98
|
| 238 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.90
|
|
| 350 | - | - | - |
Deep-Palm: 0.07
|
|
| 361 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.66
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.714
5
Brain
Specificity: 0.172
5/5 (100.0%)
2
Testis
Specificity: 0.069
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
22
Brain tissue (Mass)
Specificity: 0.759
22/56 (39.3%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.