Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8R1B4 | Eif3c | Eukaryotic translation initiation factor 3 … | Mus musculus (Mouse) | 911 aa |
Protein Details: Q8R1B4 (Eif3c)
Protein Information
| Accession | Q8R1B4 |
|---|---|
| Protein Names | Eukaryotic translation initiation factor 3 subunit C (eIF3c) (Eukaryotic translation initiation factor 3 subunit 8) (eIF3 p110) |
| Gene Symbol | Eif3c |
| Organism | Mus musculus (Mouse) |
| Length | 911 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSRFFTTGSD11SESESSLSGE21ELVTKPVSGN31YGKQPLLLSE41DEEDTKRVVR
51-10051SAKDKRFEEL61TNLIRTIRNA71MKIRDVTKCL81EEFELLGKAY91GKAKSIVDKE
101-150101GVPRFYIRIL111ADLEDYLNEL121WEDKEGKKKM131NKNNAKALST141LRQKIRKYNR
151-200151DFESHITNYK161QNPEQSADED171AEKNEEDSEG181SSDEDEDEDG191VGNTTFLKKK
201-250201QESSGESRKF211HKKMEDDDED221SEDSEDEEWD231TSSTSSDSDS241EEEEGKQTVL
251-300251ASKFLKKAPT261TEEDKKAAEK271KREDKAKKKH281DRKSKRLDEE291EEDNEGGEWE
301-350301RVRGGVPLVK311EKPKMFAKGT321EITHAVVIKK331LNEILQVRGK341KGTDRATQIE
351-400351LLQLLVQIAA361ENNLGVGVIV371KIKFNIIASL381YDYNPNLATY391MKPEMWQMCL
401-450401DCINELMDTL411VAHSNIFVGE421NILEESENLH431NFDQPLRVRG441CILTLVERMD
451-500451EEFTKIMQNT461DPHSQEYVEH471LKDEAQVCAI481IERVQRYLEE491KGTTEEICQI
501-550501YLRRILHTYY511KFDYKAHQRQ521LTPPEGSSKS531EQDQAENEGE541DSAVLMERLC
551-600551KYIYAKDRTD561RIRTCAILCH571IYHHALHSRW581YQARDLMLMS591HLQDNIQHAD
601-650601PPVQILYNRT611MVQLGICAFR621QGLTKDAHNA631LLDIQSSGRA641KELLGQGLLL
651-700651RSLQERNQEQ661EKVERRRQVP671FHLHINLELL681ECVYLVSAML691LEIPYMAAHE
701-750701SDARRRMISK711QFHHQLRVGE721RQPLLGPPES731MREHVVAASK741AMKMGDWKTC
751-800751HSFIINEKMN761GKVWDLFPEA771DKVRTMLVRK781IQEESLRTYL791FTYSSVYDSI
801-850801SMETLSDMFE811LDLPTVHSII821SKMIINEELM831ASLDQPTQTV841VMHRTEPTAQ
851-900851QNLALQLAEK861LGSLVENNER871VFDHKQGTYG881GYFRDQKDGY891RKNEGYMRRG
901-911901GYRQQQSQTA911Y
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 79 | - | - | - |
Deep-Palm: 0.96
|
|
| 399 | - | - | - |
Deep-Palm: 0.06
|
|
| 402 | - | - | - |
Deep-Palm: 0.04
|
|
| 441 | SWISSPALM DBPTM CYSMODDB | Eukaryotic translation initiation factor 3 subunit 8 N-terminus |
liver
(26165157)
MLE
(39008777)
Liver
(28526873)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.86
|
| 478 | - | - | - |
Deep-Palm: 0.95
|
|
| 498 | - | - | - |
Deep-Palm: 0.93
|
|
| 550 | - | - | - |
Deep-Palm: 0.89
|
|
| 565 | - | - | - |
Deep-Palm: 0.06
|
|
| 569 | - | - | - |
Deep-Palm: 0.23
|
|
| 617 | SWISSPALM DBPTM CYSMODDB | Eukaryotic translation initiation factor 3 subunit 8 N-terminus | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.70
|
| 682 | - | - | - |
Deep-Palm: 0.37
|
|
| 750 | - | - | - |
Deep-Palm: 0.47
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.571
4
Liver
Specificity: 0.571
4/4 (100.0%)
2
Testis
Specificity: 0.286
2/2 (100.0%)
1
Brain
Specificity: 0.143
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.