Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8R3N6 | Thoc1 | THO complex subunit 1 (Nuclear … | Mus musculus (Mouse) | 657 aa |
Protein Details: Q8R3N6 (Thoc1)
Protein Information
| Accession | Q8R3N6 |
|---|---|
| Protein Names | THO complex subunit 1 (Nuclear matrix protein p84) |
| Gene Symbol | Thoc1 |
| Organism | Mus musculus (Mouse) |
| Length | 657 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSPTPALFSL11PEARTRFTKS21TREALNNKNI31KPLLTAFSQL41PGSENEKKCT
51-10051LDQAFRGVLE61EEIINHSACE71NVLAIISLAI81GGVTESVCTA91STPFVLLGDV
101-150101LDCLPLDQCD111TIFTFVEKNV121ATWKSNTFYS131AGKNYLLRMC141NDLLRRLSKS
151-200151QNTVFCGRIQ161LFLARLFPLS171EKSGLNLQSQ181FNLENVTVFN191TNEQESTLGQ
201-250201KHTEDREEGM211DVEEGEMGDD221EAPTTCSIPI231DYNLYRKFWS241LQDYFRNPVQ
251-300251CYEKISWKTF261LKYSEEVLAV271FKSYKLDDTQ281ASRKKMEELK291TGGEHVYFAK
301-350301FLTSEKLMDL311QLSDSNFRRH321ILLQYLILFQ331YLKGQVKFKS341SNYVLTDEQS
351-400351LWIEDTTKSV361YQLLSENPPD371GERFSKMVEH381ILNTEENWNS391WKNEGCPSFV
401-450401KERASDTKPT411RVVRKRAAPE421DFLGKGPNKK431ILIGNEELTR441LWNLCPDNME
451-500451ACKSETREYM461PTLEEFFEEA471IEQADPENMV481ESEYKAVNNS491NYGWRALRLL
501-550501ARRSPHFFQP511TNQQFKSLPE521YLENMVIKLA531KELPPPSEEI541KTGEDEDEED
551-600551NDALLKENES561PDVRRDKPIT571GEQIESFANK581LGEQWKILAP591YLEIKDSDIR
601-650601QIECDSEDMK611MRAKQLLVAW621QDQEGVHATT631DNLISALNKS641GLSDLAESLT
651-657651NDTETNS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 49 | - | - | - |
Deep-Palm: 0.93
|
|
| 69 | - | - | - |
Deep-Palm: 0.82
|
|
| 88 | - | - | - |
Deep-Palm: 0.97
|
|
| 103 | - | - | - |
Deep-Palm: 0.86
|
|
| 109 | - | - | - |
Deep-Palm: 0.71
|
|
| 140 | SWISSPALM DBPTM CYSMODDB | THO complex subunit 1 transcription elongation factor |
Forebrain
(28680068)
| - |
GPS-Palm: 0.95
Deep-Palm: 0.91
|
| 156 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.95
|
|
| 226 | - | - | - |
Deep-Palm: 0.25
|
|
| 251 | - | - | - |
Deep-Palm: 0.27
|
|
| 396 | - | - | - |
Deep-Palm: 0.38
|
|
| 445 | - | - | - |
Deep-Palm: 0.44
|
|
| 452 | - | - | - |
Deep-Palm: 0.23
|
|
| 604 | - | - | - |
Deep-Palm: 0.94
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Testis
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.