Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8R464 | Cadm4 | Cell adhesion molecule 4 (Immunoglobulin … | Mus musculus (Mouse) | 388 aa |
Protein Details: Q8R464 (Cadm4)
Protein Information
| Accession | Q8R464 |
|---|---|
| Protein Names | Cell adhesion molecule 4 (Immunoglobulin superfamily member 4C) (IgSF4C) (Nectin-like protein 4) (NECL-4) (TSLC1-like protein 2) |
| Gene Symbol | Cadm4 |
| Organism | Mus musculus (Mouse) |
| Length | 388 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 31311849 31772009 34200797 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGRARRFQWP11LLLLWAAAAG21PGTGQEVQTE31NVTVAEGGVA41EITCRLHQYD
51-10051GSIVVIQNPA61RQTLFFNGTR71ALKDERFQLE81EFSPRRVRIR91LSDARLEDEG
101-150101GYFCQLYTED111THHQIATLTV121LVAPENPVVE131VREQAVEGGE141VELSCLVPRS
151-200151RPAAVLRWYR161DRKELKGVSS171GQENGKVWSV181ASTVRFRVDR191KDDGGIVICE
201-250201AQNQALPSGH211SKQTQYVLDV221QYSPTARIHA231SQAVVREGDT241LVLTCAVTGN
251-300251PRPNQIRWNR261GNESLPERAE271AVGETLTLPG281LVSADNGTYT291CEAANKHGHA
301-350301RALYVLVVYD311PGAVVEAQTS321VPYAIVGGIL331ALLVFLIICV341LVGMVWCSVR
351-388351QKGSYLTHEA361SGLDEQGEAR371EAFLNGGDGH381KRKEEFFI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 44 | - | - | - |
Deep-Palm: 0.61
|
|
| 104 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.44
|
|
| 145 | - |
Brain
(34200797)
|
Brain
(35358180)
|
Deep-Palm: 0.96
|
|
| 199 | - |
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.74
|
|
| 245 | Immunoglobulin domain |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.88
|
|
| 291 | - | - | - |
Deep-Palm: 0.80
|
|
| 339 | - | - | - |
Deep-Palm: 0.97
|
|
| 347 | - | - | - |
Deep-Palm: 0.95
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.833
5
Brain
Specificity: 0.132
5/5 (100.0%)
1
NSC
Specificity: 0.026
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
32
Brain tissue (Mass)
Specificity: 0.842
32/56 (57.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.