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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
Q8TCZ8 APOE Apolipoprotein E Homo sapiens (Human) 57 aa

Protein Details: Q8TCZ8 (APOE)

Protein Information
AccessionQ8TCZ8
Protein NamesApolipoprotein E
Gene SymbolAPOE
OrganismHomo sapiens (Human)
Length57 aa
IsoformsNo isoforms
Related PMIDs 26876311
Database SourcesNo database sources
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501RLGADMEDVR11GRLVQYRGEV21QAMLGQSTEE31LRVRLASHLR41KLRKRLLRDA
51-5751DDLQKCL
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
56 - - -
Deep-Palm: 0.06
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
frontal cortex
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). Blue bars: Literature data, Orange bars: Mass Spectrometry data. The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
56 R → C 0.002288 SNP Missense Mutation STAD