Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8VBZ3 | Clptm1; N14 | Putative lipid scramblase CLPTM1 (Cleft … | Mus musculus (Mouse) | 664 aa |
Protein Details: Q8VBZ3 (Clptm1)
Protein Information
| Accession | Q8VBZ3 |
|---|---|
| Protein Names | Putative lipid scramblase CLPTM1 (Cleft lip and palate transmembrane protein 1 homolog) (Thymic epithelial cell surface antigen) |
| Gene Symbol | Clptm1; N14 |
| Organism | Mus musculus (Mouse) |
| Length | 664 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31772009 34200797 35358180 35477839 37925639 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.594
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
19
Liver tissue
Specificity: 0.594
19/19 (100.0%)
8
Brain tissue
Specificity: 0.250
8/12 (66.7%)
3
Neural Stem Cells
Specificity: 0.094
3/3 (100.0%)
2
Testis
Specificity: 0.062
2/2 (100.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MAAAQEADGA11GSAVVAAGGG21SSGQVTSNGS31IGRDTPAETQ41PQNPPPQPAP
51-10051NAWQVIKGVL61FRIFIIWAIS71SWFRRGPSPQ81DQSGPGGAPR91VASRNLFPKD
101-150101TLMNLHVYIS111EHEHFTDFNA121TSALFWEQHD131LVYGDWTSGE141NSDGCYEHFA
151-200151ELDIPQSVQQ161NGSIYIHVYF171TKSGFHPDPR181QKALYRRLAT191VHMSRMINKY
201-250201KRRRFQKTKN211LLTGETEADP221EMIKRAEDYG231PVEVISHWHP241NITINIVDDH
251-300251TPWVKGSVPP261PLDQYVKFDA271VSGDYYPIIY281FNDYWNLQKD291YYPINESLAS
301-350301LPLRVSFCPL311SLWRWQLYAA321QSTKSPWNFL331GDELYEQSDE341EQDSVKVALL
351-400351ETSPYLLALT361IIVSIVHSVF371EFLAFKNDIQ381FWNSRQSLEG391LSVRSVFFGV
401-450401FQSFVVLLYI411LDNETNFVVQ421VSVFIGVLID431LWKITKVMDV441RLDREHRVAG
451-500451IFPCPTFKDK461STYIESSTKV471YDDMAFRYLS481WILFPLLGCY491AVYSLLYLEH
501-550501KGWYSWVLSM511LYGFLLTFGF521ITMTPQLFIN531YKLKSVAHLP541WRMLTYKALN
551-600551TFIDDLFAFV561IKMPVMYRIG571CLRDDVVFFI581YLYQRWIYRV591DPTRVNEFGM
601-650601SGEDVSAAAS611RAQASTAAGA621LTPAPSTAVS631GEDASTVPKA641TSGACTASQP
651-664651QEAPPKPAED661KKKD
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 308 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | Cleft lip and palate transmembrane protein 1 (CLPTM1) | 28526873 |
| 454 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | Cleft lip and palate transmembrane protein 1 (CLPTM1) | 28526873 |
| 645 | Experimental | - | 34200797 |