Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8VCC1 | Hpgd | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] (15-PGDH) (EC … | Mus musculus (Mouse) | 269 aa |
Protein Details: Q8VCC1 (Hpgd)
Protein Information
| Accession | Q8VCC1 |
|---|---|
| Protein Names | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] (15-PGDH) (EC 1.1.1.141) (Eicosanoid/docosanoid dehydrogenase [NAD(+)]) (EC 1.1.1.-, EC 1.1.1.232) (Prostaglandin dehydrogenase 1) |
| Gene Symbol | Hpgd |
| Organism | Mus musculus (Mouse) |
| Length | 269 aa |
| Isoforms | No isoforms |
| Related PMIDs | 37925639 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MHVNGKVALV11TGAAQGIGKA21FAEALLLHGA31KVALVDWNLE41AGVKCKAALD
51-10051EQFEPQKTLF61VQCDVADQKQ71LRDTFRKVVD81HFGRLDILVN91NAGVNNEKNW
101-150101EQTLQINLVS111VISGTYLGLD121YMSKQNGGEG131GIIINMSSLA141GLMPVAQQPV
151-200151YCASKHGIIG161FTRSAAMAAN171LMKSGVRLNV181ICPGFVDTPI191LESIEKEENM
201-250201GQYIEYKDQI211KAMMKFYGVL221HPSTIANGLI231NLIEDDALNG241AIMKITASKG
251-269251IHFQDYDISP261LLVKAPLTS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 45 | NAD(P)-binding domain superfamily 15-HYDROXYPROSTAGLANDIN DEHYDROGENASE [NAD(+)] | - | - |
Deep-Palm: 0.98
|
|
| 63 | - | - | - |
Deep-Palm: 0.92
|
|
| 152 | - | - | - |
Deep-Palm: 0.91
|
|
| 182 | - | - | - |
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Liver
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.