Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8VCH7 | Rdh10 | Retinol dehydrogenase 10 (EC 1.1.1.300) | Mus musculus (Mouse) | 341 aa |
Protein Details: Q8VCH7 (Rdh10)
Protein Information
| Accession | Q8VCH7 |
|---|---|
| Protein Names | Retinol dehydrogenase 10 (EC 1.1.1.300) |
| Gene Symbol | Rdh10 |
| Organism | Mus musculus (Mouse) |
| Length | 341 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MNIVVEFFVV11TFKVLWAFVL21AAARWLVRPK31EKSVAGQVCL41ITGAGSGLGR
51-10051LFALEFARRR61ALLVLWDINT71QSNEETAGMV81RHIYRDLEAA91DAAALQAGKG
101-150101EEEILPPCNL111QVFTYTCDVG121KRENVYLTAE131RVRKEVGEVS141VLVNNAGVVS
151-200151GHHLLECPDE161LIERTMMVNC171HAHFWTTKAF181LPTMLEINHG191HIVTVASSLG
201-250201LFSTAGVEDY211CASKFGVVGF221HESLSHELKA231AEKDGIKTTL241VCPYLVDTGM
251-300251FRGCRIRKEI261EPFLPPLKPD271YCVKQAMRAI281LTDQPMVCTP291RLMYIVTFMK
301-341301SILPFEAVVC311MYRFLGADKC321MYPFIAQRKQ331ATNNNEAKNG341I
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 39 | NAD(P)-binding domain superfamily PKSB | - | - |
Deep-Palm: 0.98
|
|
| 108 | - | - | - |
Deep-Palm: 0.94
|
|
| 117 | - | - | - |
Deep-Palm: 0.74
|
|
| 157 | - | - | - |
Deep-Palm: 0.86
|
|
| 170 | - | - | - |
Deep-Palm: 0.20
|
|
| 211 | - | - | - |
Deep-Palm: 0.93
|
|
| 242 | - | - | - |
Deep-Palm: 0.97
|
|
| 254 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.94
|
|
| 272 | - | - | - |
Deep-Palm: 0.82
|
|
| 288 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.65
|
| 310 | - | - | - |
Deep-Palm: 0.27
|
|
| 320 | - | - | - |
Deep-Palm: 0.16
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Liver
Specificity: 1.000
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.