Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8VCM8 | Ncln | BOS complex subunit NCLN (Nicalin) … | Mus musculus (Mouse) | 563 aa |
Protein Details: Q8VCM8 (Ncln)
Protein Information
| Accession | Q8VCM8 |
|---|---|
| Protein Names | BOS complex subunit NCLN (Nicalin) (Nicastrin-like protein) |
| Gene Symbol | Ncln |
| Organism | Mus musculus (Mouse) |
| Length | 563 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 34884899 35477839 37925639 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLEEAGEVLE11NVLKASCLPL21GFIVFLPAVL31LLVAPPLPAA41DAAHEFTVYR
51-10051MQQYDLQGQP61YGTRNAVLNT71EARTVDADVL81SRRCVLMRLL91DFSYEHYQKA
101-150101LRQSAGAVVI111ILPRAMAAVP121QDVVRQFMEI131EPEMLAMETV141VPVYFAVEDE
151-200151ALLSIYEQTQ161AASASQGSAS171AAEVLLHTAT181ANGFQMVTSG191AQSQAVSDWL
201-250201ITSVEGRLTG211LGGEDLPTIV221IVAHYDAFGV231APWLSLGADS241NGSGISVLLE
251-300251LARLFSRLYT261YKRTHAAYNL271LFFASGGGKF281NYQGTKRWLE291DSLDHTDSSL
301-350301LQDNVAFVLC311LDTVGRGSHL321RLHVSKPPRE331GTLQHAFLRE341LETVAAHQFP
351-400351DVSFSMVHKK361INLADDVLAW371EHERFAIRRL381PAFTLSHLES391HRAGPRSSIM
401-450401DVRSRVDSKT411LTRNTRIIAE421ALTRVIYNLT431EKGTPPDMPV441FTEQMQVQEE
451-500451QIDSVMDWLT461NQPRAAQLLD471KDGTFLSTLE481HFLSRYLKDV491RQHHVKADKR
501-550501DPEFVFYDQL511KQVMNAYRVK521PAIFDLLLAL531CIGAYLGMAY541TAVQHFHVLY
551-563551KTVQRLLLKA561KAQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 17 | - | - | - |
Deep-Palm: 0.98
|
|
| 84 | - | - | - |
Deep-Palm: 0.79
|
|
| 310 | - | - | - |
Deep-Palm: 0.93
|
|
| 531 | - | - | - |
Deep-Palm: 0.61
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
2
Liver
Specificity: 0.400
2/2 (100.0%)
2
Testis
Specificity: 0.400
2/2 (100.0%)
1
Raw 264.7
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.