Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8VCR2 | Hsd17b13 | 17-beta-hydroxysteroid dehydrogenase 13 (17-beta-HSD 13) … | Mus musculus (Mouse) | 304 aa |
Protein Details: Q8VCR2 (Hsd17b13)
Protein Information
| Accession | Q8VCR2 |
|---|---|
| Protein Names | 17-beta-hydroxysteroid dehydrogenase 13 (17-beta-HSD 13) (EC 1.1.1.-) (EC 1.1.1.62) (Alcohol dehydrogenase PAN1B-like) (Hepatic retinol/retinal dehydrogenase) (EC 1.1.1.105) (Short-chain dehydrogenase/reductase 9) |
| Gene Symbol | Hsd17b13 |
| Organism | Mus musculus (Mouse) |
| Length | 304 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MNLILEFLLL11VGVIIYSYLE21SLVKFFIPRR31RKSVTGQTVL41ITGAGHGIGR
51-10051LTAYEFAKQK61SRLVLWDINK71RGVEETADKC81RKLGAVVHVF91VVDCSNRAEI
101-150101YNSVDQVKRE111VGDVEIVVNN121AGAIYPADLL131SAKDEEITKT141FEVNILGHFW
151-200151IIKALLPSML161RRNSGHIVTV171ASVCGHGVIP181YLIPYCSSKF191AAVGFHRALT
201-250201AELDTLGKTG211IQTSCLCPVF221VNTGFTKNPS231TRLWPVLEPE241EVARSLINGI
251-300251LTNKKMIFVP261SYINISLILE271KGPGFSSKHP281HGGSQQPVTP291IPGDLTPSSD
301-304301FLKH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 80 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.91
|
| 94 | - | - | - |
Deep-Palm: 0.82
|
|
| 174 | - | - | - |
Deep-Palm: 0.78
|
|
| 186 | - | - | - |
Deep-Palm: 0.92
|
|
| 215 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.96
|
| 217 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Liver
Specificity: 1.000
6/6 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.