Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8VCT3 | Rnpep | Aminopeptidase B (AP-B) (EC 3.4.11.6) … | Mus musculus (Mouse) | 650 aa |
Protein Details: Q8VCT3 (Rnpep)
Protein Information
| Accession | Q8VCT3 |
|---|---|
| Protein Names | Aminopeptidase B (AP-B) (EC 3.4.11.6) (Arginine aminopeptidase) (Arginyl aminopeptidase) (Cytosol aminopeptidase IV) |
| Gene Symbol | Rnpep |
| Organism | Mus musculus (Mouse) |
| Length | 650 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MESGGPGNYS11AAARRPLHSA21QAVDVASASS31FRAFEILHLH41LDLRAEFGPP
51-10051GPGPGSRGLS61GTATLELRCL71LPEGASELRL81DSHSCLEVTA91ATLRRGQPGD
101-150101QQAPAEPVPF111HTQPFSHYGQ121ALCVAFRQPC131GAADRFELEL141TYRVGEGPGV
151-200151CWLAPEQTAG161KKKPFVYTQG171QAVLNRAFFP181CFDTPAVKCT191YSALIEVPDG
201-250201FTAVMSADTW211EKRGPNKFFF221QMSHPIPSYL231IALAIGDLAS241AEVGPRSRVW
251-300251AEPCLIEAAK261EEYSGVIEEF271LATGEKLFGP281YVWGRYDLLF291MPPSFPFGGM
301-350301ENPCLTFVTP311CLLAGDRSLA321DVIIHEISHS331WFGNLVTNAN341WGEFWLNEGF
351-400351TMYAQRRIST361ILFGAAYTCL371EAATGRALLR381QHMNVSGEEN391PLNKLRVKIE
401-450401PGVDPDDTYN411ETPYEKGYCF421VSYLAHLVGD431QDQFDKFLKA441YVDEFKFQSI
451-500451LAEDFLEFYL461EYFPELKKKG471VDSIPGFEFD481RWLNTPGWPP491YLPDLSPGDS
501-550501LMKPAEELAE511LWVTSEPDMQ521AIEAVAISTW531KTYQLVYFLD541KILQKSPLPP
551-600551GNVKKLGETY561PKISNAQNAE571LRLRWGQIIL581KNDYQEEFQK591VKDFLQSQGK
601-650601QKYTLPLYHA611MMGGSEMART621LAKDTFAATA631SQLHSNVVNY641VQQILAPKDS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 69 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.98
|
|
| 85 | - | - | - |
Deep-Palm: 0.97
|
|
| 123 | - | - | - |
Deep-Palm: 0.46
|
|
| 130 | - | - | - |
Deep-Palm: 0.82
|
|
| 151 | - | - | - |
Deep-Palm: 0.94
|
|
| 181 | - |
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.81
|
|
| 189 | - | - | - |
Deep-Palm: 0.78
|
|
| 254 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.97
|
|
| 304 | - | - | - |
Deep-Palm: 0.78
|
|
| 311 | - | - | - |
Deep-Palm: 0.85
|
|
| 369 | - | - | - |
Deep-Palm: 0.97
|
|
| 419 | - | - | - |
Deep-Palm: 0.29
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
3
Liver
Specificity: 0.167
3/3 (100.0%)
2
Testis
Specificity: 0.111
2/2 (100.0%)
1
Brain
Specificity: 0.056
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
12
Brain tissue (Mass)
Specificity: 0.667
12/56 (21.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.