Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8VCV1 | Abhd17c | Alpha/beta hydrolase domain-containing protein 17C … | Mus musculus (Mouse) | 320 aa |
Protein Details: Q8VCV1 (Abhd17c)
Protein Information
| Accession | Q8VCV1 |
|---|---|
| Protein Names | Alpha/beta hydrolase domain-containing protein 17C (Abhydrolase domain-containing protein 17C) (EC 3.1.2.22) |
| Gene Symbol | Abhd17c |
| Organism | Mus musculus (Mouse) |
| Length | 320 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31772009 34200797 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPEPGPRMNG11FSLGELCWLF21CCPPCPSRIA31AKLAFLPPEP41TYTVLAPEQR
51-10051APAPAATPAP61APAAQPAPAE71EGAGPGACSL81HLSERADWQY91SQRELDAVEV
101-150101FFSRTARDNR111LGCMFVRCAP121SSRYTLLFSH131GNAVDLGQMC141SFYIGLGSRI
151-200151NCNIFSYDYS161GYGVSSGKPS171EKNLYADIDA181AWQALRTRYG191VSPENIILYG
201-250201QSIGTVPTVD211LASRYECAAV221ILHSPLMSGL231RVAFPDTRKT241YCFDAFPSID
251-300251KISKVTSPVL261VIHGTEDEVI271DFSHGLAMYE281RCPRAVEPLW291VEGAGHNDIE
301-320301LYAQYLERLK311QFISHELPNS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 17 | - | - | - |
Deep-Palm: 0.83
|
|
| 21 | - | - | - |
Deep-Palm: 0.83
|
|
| 22 | - | - | - |
Deep-Palm: 0.83
|
|
| 25 | - | - | - |
Deep-Palm: 0.95
|
|
| 78 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.92
|
|
| 113 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.81
|
|
| 118 | - | - | - |
Deep-Palm: 0.85
|
|
| 140 | - | - | - |
Deep-Palm: 0.51
|
|
| 152 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.19
|
|
| 217 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.98
|
|
| 242 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.95
|
| 282 | - | - | - |
Deep-Palm: 0.76
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.625
5
Liver
Specificity: 0.200
5/5 (100.0%)
2
Brain
Specificity: 0.080
2/2 (100.0%)
1
NSC
Specificity: 0.040
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
17
Brain tissue (Mass)
Specificity: 0.680
17/56 (30.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.