Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8VCW8 | Acsf2 | Medium-chain acyl-CoA ligase ACSF2, mitochondrial … | Mus musculus (Mouse) | 615 aa |
Protein Details: Q8VCW8 (Acsf2)
Protein Information
| Accession | Q8VCW8 |
|---|---|
| Protein Names | Medium-chain acyl-CoA ligase ACSF2, mitochondrial (EC 6.2.1.2) |
| Gene Symbol | Acsf2 |
| Organism | Mus musculus (Mouse) |
| Length | 615 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAVYHGMLRF11GRLCIASLGA21RGPRTLLSRP31RPNSKLQSVR41ALSSGMVNCT
51-10051NPLPIGGLSY61IQGHTDSHLV71NTTVGECLDA81TAQRFPDREA91LVILHENIRL
101-150101NFAQLKEEVD111KAASGLLSIG121LRKGDRLGMW131GPNSYAWVLI141QLATAQAGII
151-200151LVSVNPAYQS161SELEYVLRKV171GCKGIVFPKQ181FKTQQYYDIL191KQVCPELEKA
201-250201QPGALKSERL211PDLTTVISVD221APLPGTLLLD231DIVAAGGKEQ241NLAQLRYNQR
251-300251FLSCYDPINI261QFTSGTTGNP271KGATLSHHNI281VNNSMLIGQR291LKMPTKTAEE
301-350301LRLVLPSPLY311HCLGSVGGTM321VSMMHGATLL331LSSPSFNGKK341ALEAISREKG
351-400351TLLYGTPTMF361VDILNQPDFS371SYDFTSIRGG381VIAGSPAPPE391LIRAIINKMN
401-450401MKELVVVYGT411TENSPVTFMN421FPEDTLEQKA431GSVGRIMPHT441EAQIVNVETG
451-500451ELTNLNVPGE461LYIRGYCVMQ471GYWGEPQKTF481ETVGQDKWYR491TGDIALMDEQ
501-550501GFCKIVGRSK511DMIIRGGENI521YPAELEDFFL531KHPQVQEAQV541VGVKDERMGE
551-600551EICACIRLKS561GETTTAEEIK571AFCKGKISHF581KIPRYIVFVE591GYPLTISGKI
601-615601QKFKLREQME611QHLKL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 14 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.96
|
|
| 49 | - | - | - |
Deep-Palm: 0.93
|
|
| 77 | - | - | - |
Deep-Palm: 0.95
|
|
| 172 | - | - | - |
Deep-Palm: 0.95
|
|
| 194 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.96
|
| 254 | SWISSPALM DBPTM CYSMODDB | AMP-binding enzyme |
Liver
(28526873)
liver
(26165157)
|
Brain
(35358180)
|
Deep-Palm: 0.33
|
| 312 | - | - | - |
Deep-Palm: 0.97
|
|
| 467 | SWISSPALM DBPTM CYSMODDB | AMP-binding enzyme |
Liver
(28526873)
| - |
Deep-Palm: 0.46
|
| 503 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.91
|
| 553 | SWISSPALM DBPTM CYSMODDB | AMP-binding enzyme C-terminal domain |
Liver
(28526873)
| - |
GPS-Palm: 0.96
Deep-Palm: 0.97
|
| 555 | SWISSPALM DBPTM CYSMODDB | AMP-binding enzyme C-terminal domain |
Liver
(28526873)
| - |
GPS-Palm: 0.96
Deep-Palm: 0.96
|
| 573 | - | - | - |
Deep-Palm: 0.81
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.571
4
Liver
Specificity: 0.182
4/4 (100.0%)
2
Testis
Specificity: 0.091
2/2 (100.0%)
1
Brain
Specificity: 0.045
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
15
Brain tissue (Mass)
Specificity: 0.682
15/56 (26.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.