Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8VDN2 | Atp1a1 | Sodium/potassium-transporting ATPase subunit alpha-1 (Na(+)/K(+) … | Mus musculus (Mouse) | 1023 aa |
Protein Details: Q8VDN2 (Atp1a1)
Protein Information
| Accession | Q8VDN2 |
|---|---|
| Protein Names | Sodium/potassium-transporting ATPase subunit alpha-1 (Na(+)/K(+) ATPase alpha-1 subunit) (EC 7.2.2.13) (Sodium pump subunit alpha-1) |
| Gene Symbol | Atp1a1 |
| Organism | Mus musculus (Mouse) |
| Length | 1023 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 29575903 29733200 31311849 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGKGVGRDKY11EPAAVSEHGD21KKGKKAKKER31DMDELKKEVS41MDDHKLSLDE
51-10051LHRKYGTDLS61RGLTPARAAE71ILARDGPNAL81TPPPTTPEWV91KFCRQLFGGF
101-150101SMLLWIGAIL111CFLAYGIRSA121TEEEPPNDDL131YLGVVLSAVV141IITGCFSYYQ
151-200151EAKSSKIMES161FKNMVPQQAL171VIRNGEKMSI181NAEDVVVGDL191VEVKGGDRIP
201-250201ADLRIISANG211CKVDNSSLTG221ESEPQTRSPD231FTNENPLETR241NIAFFSTNCV
251-300251EGTARGIVVY261TGDRTVMGRI271ATLASGLEGG281QTPIAEEIEH291FIHLITGVAV
301-350301FLGVSFFILS311LILEYTWLEA321VIFLIGIIVA331NVPEGLLATV341TVCLTLTAKR
351-400351MARKNCLVKN361LEAVETLGST371STICSDKTGT381LTQNRMTVAH391MWFDNQIHEA
401-450401DTTENQSGVS411FDKTSATWFA421LSRIAGLCNR431AVFQANQENL441PILKRAVAGD
451-500451ASESALLKCI461EVCCGSVMEM471REKYSKIVEI481PFNSTNKYQL491SIHKNPNASE
501-550501PKHLLVMKGA511PERILDRCSS521ILLHGKEQPL531DEELKDAFQN541AYLELGGLGE
551-600551RVLGFCHLLL561PDEQFPEGFQ571FDTDDVNFPV581DNLCFVGLIS591MIDPPRAAVP
601-650601DAVGKCRSAG611IKVIMVTGDH621PITAKAIAKG631VGIISEGNET641VEDIAARLNI
651-700651PVNQVNPRDA661KACVVHGSDL671KDMTSEELDD681ILRYHTEIVF691ARTSPQQKLI
701-750701IVEGCQRQGA711IVAVTGDGVN721DSPALKKADI731GVAMGIVGSD741VSKQAADMIL
751-800751LDDNFASIVT761GVEEGRLIFD771NLKKSIAYTL781TSNIPEITPF791LIFIIANIPL
801-850801PLGTVTILCI811DLGTDMVPAI821SLAYEQAESD831IMKRQPRNPK841TDKLVNERLI
851-900851SMAYGQIGMI861QALGGFFTYF871VILAENGFLP881FHLLGIRETW891DDRWVNDVED
901-950901SYGQQWTYEQ911RKIVEFTCHT921AFFVSIVVVQ931WADLVICKTR941RNSVFQQGMK
951-1000951NKILIFGLFE961ETALAAFLSY971CPGMGAALRM981YPLKPTWWFC991AFPYSLLIFV
1001-10231001YDEVRKLIIR1011RRPGGWVEKE1021TYY
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 93 | SWISSPALM DBPTM CYSMODDB | Cation transporter/ATPase N-terminus |
Forebrain
(28680068)
| - |
Deep-Palm: 0.84
|
| 111 | - | - | - |
Deep-Palm: 0.85
|
|
| 145 | - | - | - |
Deep-Palm: 0.93
|
|
| 211 | P-type ATPase actuator domain |
Brain
(34200797)
|
Brain
(35358180)
|
Deep-Palm: 0.97
|
|
| 249 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.94
|
| 343 | - | - | - |
Deep-Palm: 0.97
|
|
| 356 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.96
|
|
| 374 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.98
|
| 428 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.89
|
|
| 459 | - | - | - |
Deep-Palm: 0.93
|
|
| 463 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.90
|
|
| 464 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.89
|
|
| 518 | SWISSPALM DBPTM CYSMODDB | P-type ATPase cytoplasmic domain N |
liver
(26165157)
|
Brain
(35358180)
|
Deep-Palm: 0.98
|
| 556 | - | - | - |
Deep-Palm: 0.98
|
|
| 584 | - | - | - |
Deep-Palm: 0.32
|
|
| 606 | - | - | - |
Deep-Palm: 0.95
|
|
| 663 | - |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.85
|
|
| 705 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
liver
(26165157)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.95
Deep-Palm: 0.90
|
| 809 | - | - | - |
Deep-Palm: 0.97
|
|
| 918 | - | - | - |
Deep-Palm: 0.05
|
|
| 937 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.58
|
|
| 971 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.96
|
|
| 990 | - | - | - |
Deep-Palm: 0.39
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.357
5
Liver
Specificity: 0.098
5/5 (100.0%)
5
Brain
Specificity: 0.098
5/5 (100.0%)
2
Raw 264.7
Specificity: 0.039
2/2 (100.0%)
2
Testis
Specificity: 0.039
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
37
Brain tissue (Mass)
Specificity: 0.725
37/56 (66.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.