Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8VDW0 | Ddx39a | ATP-dependent RNA helicase DDX39A (EC … | Mus musculus (Mouse) | 427 aa |
Protein Details: Q8VDW0 (Ddx39a)
Protein Information
| Accession | Q8VDW0 |
|---|---|
| Protein Names | ATP-dependent RNA helicase DDX39A (EC 3.6.4.13) (DEAD box protein 39) |
| Gene Symbol | Ddx39a |
| Organism | Mus musculus (Mouse) |
| Length | 427 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAEQDVENEL11LDYDEDEEPQ21APQESTPAPP31KKDVKGSYVS41IHSSGFRDFL
51-10051LKPELLRAIV61DCGFEHPSEV71QHECIPQAIL81GMDVLCQAKS91GMGKTAVFVL
101-150101ATLQQIEPVN111GQVSVLVMCH121TRELAFQISK131EYERFSKYMP141SVKVSVFFGG
151-200151LSIKKDEDVL161KKNCPHVVVG171TPGRILALVR181SRSLNLRNVK191HFVLDECDKM
201-250201LEQLDMRRDV211QEIFRLTPHE221KQCMMFSATL231SKEIRPVCRK241FMQDPMEVFV
251-300251DDETKLTLHG261LQQYYVKLKD271SEKNRKLFDL281LDVLEFNQVV291IFVKSVQRCM
301-350301ALAQLLVEQN311FPAIAIHRGM321AQEERLSRYQ331QFKDFQRRIL341VATNLFGRGM
351-400351DIERVNIVFN361YDMPEDSDTY371LHRVARAGRF381GTKGLAVTFV391SDENDAKILN
401-427401DVQDRFEVNV411AELPEEIDIS421TYIEQSR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 62 | - | - | - |
Deep-Palm: 0.88
|
|
| 74 | - | - | - |
Deep-Palm: 0.08
|
|
| 86 | - | - | - |
Deep-Palm: 0.73
|
|
| 119 | - | - | - |
Deep-Palm: 0.80
|
|
| 164 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.97
|
|
| 197 | - | - | - |
Deep-Palm: 0.90
|
|
| 223 | - | - | - |
Deep-Palm: 0.69
|
|
| 238 | - | - | - |
Deep-Palm: 0.24
|
|
| 299 | - | - | - |
Deep-Palm: 0.53
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)