Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q8WWM7 | ATXN2L | Ataxin-2-like protein (Ataxin-2 domain protein) … | Homo sapiens (Human) | 1075 aa |
Protein Details: Q8WWM7 (ATXN2L)
Protein Information
| Accession | Q8WWM7 |
|---|---|
| Protein Names | Ataxin-2-like protein (Ataxin-2 domain protein) (Ataxin-2-related protein) |
| Gene Symbol | ATXN2L |
| Organism | Homo sapiens (Human) |
| Length | 1075 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31382980 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLKPQPLQQP11SQPQQPPPTQ21QAVARRPPGG31TSPPNGGLPG41PLATSAAPPG
51-10051PPAAASPCLG61PVAAAGSGLR71RGAEGILAPQ81PPPPQQHQER91PGAAAIGSAR
101-150101GQSTGKGPPQ111SPVFEGVYNN121SRMLHFLTAV131VGSTCDVKVK141NGTTYEGIFK
151-200151TLSSKFELAV161DAVHRKASEP171AGGPRREDIV181DTMVFKPSDV191MLVHFRNVDF
201-250201NYATKDKFTD211SAIAMNSKVN221GEHKEKVLQR231WEGGDSNSDD241YDLESDMSNG
251-300251WDPNEMFKFN261EENYGVKTTY271DSSLSSYTVP281LEKDNSEEFR291QRELRAAQLA
301-350301REIESSPQYR311LRIAMENDDG321RTEEEKHSAV331QRQGSGRESP341SLASREGKYI
351-400351PLPQRVREGP361RGGVRCSSSR371GGRPGLSSLP381PRGPHHLDNS391SPGPGSEARG
401-450401INGGPSRMSP411KAQRPLRGAK421TLSSPSNRPS431GETSVPPPPA441VGRMYPPRSP
451-500451KSAAPAPISA461SCPEPPIGSA471VPTSSASIPV481TSSVSDPGVG491SISPASPKIS
501-550501LAPTDVKELS511TKEPGRTLEP521QELARIAGKV531PGLQNEQKRF541QLEELRKFGA
551-600551QFKLQPSSSP561ENSLDPFPPR571ILKEEPKGKE581KEVDGLLTSE591PMGSPVSSKT
601-650601ESVSDKEDKP611PLAPSGGTEG621PEQPPPPCPS631QTGSPPVGLI641KGEDKDEGPV
651-700651AEQVKKSTLN661PNAKEFNPTK671PLLSVNKSTS681TPTSPGPRTH691STPSIPVLTA
701-750701GQSGLYSPQY711ISYIPQIHMG721PAVQAPQMYP731YPVSNSVPGQ741QGKYRGAKGS
751-800751LPPQRSDQHQ761PASAPPMMQA771AAAAGPPLVA781ATPYSSYIPY791NPQQFPGQPA
801-850801MMQPMAHYPS811QPVFAPMLQS821NPRMLTSGSH831PQAIVSSSTP841QYPSAEQPTP
851-900851QALYATVHQS861YPHHATQLHA871HQPQPATTPT881GSQPQSQHAA891PSPVQHQAGQ
901-950901APHLGSGQPQ911QNLYHPGALT921GTPPSLPPGP931SAQSPQSSFP941QPAAVYAIHH
951-1000951QQLPHGFTNM961AHVTQAHVQT971GITAAPPPHP981GAPHPPQVML991LHPPQSHGGP
1001-10501001PQGAVPQSGV1011PALSASTPSP1021YPYIGHPQGE1031QPGQAPGFPG1041GADDRIREFS
1051-10751051LAGGIWHGRA1061EGLQVGQDAR1071VLGGE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 58 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.98
|
|
| 135 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.57
|
|
| 366 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.98
|
|
| 462 | - | - | - |
Deep-Palm: 0.88
|
|
| 628 | - | - | - |
Deep-Palm: 0.95
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
1
HAP1 cell
Specificity: 0.500
1/1 (100.0%)
1
U937 cell
Specificity: 0.500
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 251 | W → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 290 | R → C | 0.007299 | SNP | Missense Mutation | READ |
| 290 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 295 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 295 | R → C | 0.005618 | SNP | Missense Mutation | PAAD |
| 349 | Y → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 382 | R → C | 0.001969 | SNP | Missense Mutation | HNSC |
| 382 | R → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 382 | R → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 382 | R → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 462 | C → Vfs*19 | 0.006993 | DEL | Frame Shift Del | LAML |
| 1010 | V → Cfs*42 | 0.002976 | DEL | Frame Shift Del | KIRC |
| 1047 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |