Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q91VR5 | Ddx1 | ATP-dependent RNA helicase DDX1 (EC … | Mus musculus (Mouse) | 740 aa |
Protein Details: Q91VR5 (Ddx1)
Protein Information
| Accession | Q91VR5 |
|---|---|
| Protein Names | ATP-dependent RNA helicase DDX1 (EC 3.6.4.13) (DEAD box protein 1) |
| Gene Symbol | Ddx1 |
| Organism | Mus musculus (Mouse) |
| Length | 740 aa |
| Isoforms | No isoforms |
| Related PMIDs | 26165157 28526873 29733200 31772009 34200797 34884899 35477839 37925639 39008777 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.559
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
19
Liver tissue
Specificity: 0.559
19/19 (100.0%)
6
Liver membrane
Specificity: 0.176
6/6 (100.0%)
4
Brain tissue
Specificity: 0.118
4/12 (33.3%)
3
Neural Stem Cells
Specificity: 0.088
3/3 (100.0%)
2
Testis
Specificity: 0.059
2/2 (100.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MAAFSEMGVM11PEIAQAVEEM21DWLLPTDIQA31ESIPLILGGG41DVLMAAETGS
51-10051GKTGAFSIPV61IQIVYETLKD71QQEGKKGKTT81IKTGASVLNK91WQMNPYDRGS
101-150101AFAIGSDGLC111CQSREVKEWH121GCRGTRGLLK131GKHYYEVSCH141DQGLCRVGWS
151-200151TMQASLDLGT161DKFGFGFGGT171GKKSHNKQFD181NYGEEFTMHD191TIGCYLDIDK
201-250201GHVKFSKNGK211DLGLAFEIPA221HIKNQALFPA231CVLKNAELKF241NFGEEEFKFP
251-300251PKDGFVALSK261APDNYIVKSQ271HTGNAQVSQT281KFLPNAPKAL291IVEPSRELAE
301-350301QTLNNVKQFK311KYIDNPKLRE321LLIIGGVAAR331DQLSVLDNGV341DIVVGTPGRL
351-400351DDLVSTGKLN361LSQVRFLVLD371EADGLLSQGY381SDFINRMHNQ391IPQITCDGKR
401-450401LQVIVCSATL411HSFDVKKLSE421KIMHFPTWVD431LKGEDSVPDT441VHHVVVPVNP
451-500451KTDKLWERLG461KNHIRTDDVH471AKDNTRPGAN481SPEMWSEAIK491ILKGEYAVRA
501-550501IKEHKMDQAI511IFCRTKIDCD521NLEQYFMQQG531GGPDKKGHQF541SCVCLHGDRK
551-600551PHERKQNLER561FKKGDVRFLI571CTDVAARGID581IHGVPYVINV591TLPDEKQNYV
601-650601HRIGRVGRAE611RMGLAISLVA621TEKEKVWYHV631CSNRGKGCYN641TRLKEDGGCT
651-700651IWYNEMQLLS661EIEEHLNCTI671SQVEPDIKVP681VDEFDGKVTY691GQKRAAGGGN
701-740701YKGHVDVLAP711TVQELAALEK721EAQTSFLHLG731YLPNQLFRTF
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 110 | Experimental | - | 39008777 |
| 111 | Experimental | - | 39008777 |
| 231 | Prediction (High) | - | - |
| 406 | Experimental CYSMODDB SWISSPALM DBPTM | - | 26165157 |
| 513 | Experimental CYSMODDB SWISSPALM DBPTM | - | 28526873 |
| 571 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | Helicase conserved C-terminal domain | 28526873 |