Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q91W86 | Vps11 | Vacuolar protein sorting-associated protein 11 … | Mus musculus (Mouse) | 941 aa |
Protein Details: Q91W86 (Vps11)
Protein Information
| Accession | Q91W86 |
|---|---|
| Protein Names | Vacuolar protein sorting-associated protein 11 homolog |
| Gene Symbol | Vps11 |
| Organism | Mus musculus (Mouse) |
| Length | 941 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 35477839 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAYLQWRRF11VFFEKELVKE21PLGNDGAAPG31AAPVSGSAAS41KFLCLPPGIT
51-10051VCDSGRGSLV61FGDMEGQIWF71LPRSLQLTGF81QAYKLRVTHL91YQLKQHNILA
101-150101SVGEDEEGIN111PLVKIWNLEK121RDGGNPLCTR131IFPAIPGTEP141TVVSCLTVHE
151-200151NLNFMAIGFT161DGSVTLNKGD171ITRDRHSKTQ181ILHKGNYPVT191GLAFRQAGKT
201-250201THLFVVTTEN211VQSYIVSGKD221YPRVELDTHG231CGLRCSALSD241PSQDLQFIVA
251-300251GDECVYLYQP261DERGPCFAFE271GHKLIVHWFR281GYLVIVSRDR291KVSPKSEFTS
301-350301RDSQNSDKQI311LNIYDLCNKF321IAYSAGFEDI331VDVLAEWGSL341YVLTRDGRVH
351-400351ALQEKDTQTK361LEMLFKKNLF371EMAINLAKSQ381HLDSDGLAQI391FMQYGDHLYS
401-450401KGNHDGAVQQ411YIRTIGKLEP421SYVIRKFLDA431QRIHNLTAYL441QTLHRQSLAN
451-500451ADHTTLLLNC461YTKLKDSSKL471EEFIKTKSES481EVHFDVETAI491KVLRQAGYYS
501-550501HALYLAENHA511HHEWYLKIQL521EDIKNYQEAL531RYIGKLPFEQ541AESNMKRYGK
551-600551TLMHHIPEQT561TQLLKGLCTD571YRPSLEGRGD581REALSCRASS591EEFIPIFANN
601-650601PRELKAFLEH611MSEVQPDSPQ621GIYDTLLELR631LQNWAHEKDP641QAKEKLHAEA
651-700651ISLLKSGRFC661DVFDKALVLC671QMHDFQDGVL681YLYEQGKLFQ691QIMHYHMQHE
701-750701QYRQVIAVCE711RHGEQEPSLW721EQALSYFARK731EEDCKEYVAA741VLRHIENKSL
751-800751MPPLLVVQTL761AHNSTATLSI771IRDYLVQKLQ781KQSQQIAQDE791LRVRRYREET
801-850801TRIRQEIQEL811KASPKIFQKT821KCSICNSALE831LPSVHFLCGH841SFHQHCFESY
851-900851SESDADCPTC861LPENRKVMDM871IRAQEQKRDL881HDQFQHQLKC891SNDSFSVIAD
901-941901YFGRGVFNKL911TLLTDPPTAR921LTPSLEAGLQ931RDLLMHSRRG941T
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 44 | - | - | - |
Deep-Palm: 0.97
|
|
| 52 | - | - | - |
Deep-Palm: 0.96
|
|
| 128 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.90
|
|
| 145 | - | - | - |
Deep-Palm: 0.18
|
|
| 231 | - | - |
Brain
(31311849)
|
Deep-Palm: 0.90
|
|
| 235 | - | - | - |
Deep-Palm: 0.88
|
|
| 254 | - | - | - |
Deep-Palm: 0.34
|
|
| 266 | - | - | - |
Deep-Palm: 0.16
|
|
| 317 | - | - | - |
Deep-Palm: 0.29
|
|
| 460 | SWISSPALM DBPTM CYSMODDB | PEP5/VPS11 Clathrin repeat |
Forebrain
(28680068)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.93
|
| 568 | - | - | - |
Deep-Palm: 0.90
|
|
| 586 | - | - | - |
Deep-Palm: 0.95
|
|
| 660 | - | - | - |
Deep-Palm: 0.92
|
|
| 670 | - | - | - |
Deep-Palm: 0.38
|
|
| 709 | - | - | - |
Deep-Palm: 0.09
|
|
| 734 | - | - | - |
Deep-Palm: 0.90
|
|
| 822 | - | - | - |
Deep-Palm: 0.85
|
|
| 825 | - | - | - |
Deep-Palm: 0.43
|
|
| 838 | - | - | - |
Deep-Palm: 0.09
|
|
| 846 | - | - | - |
Deep-Palm: 0.02
|
|
| 857 | - | - | - |
Deep-Palm: 0.02
|
|
| 860 | - | - | - |
Deep-Palm: 0.05
|
|
| 890 | - | - | - |
Deep-Palm: 0.09
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Testis
Specificity: 0.667
2/2 (100.0%)
1
Brain
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.