Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q920E5 | Fdps | Farnesyl pyrophosphate synthase (FPP synthase) … | Mus musculus (Mouse) | 353 aa |
Protein Details: Q920E5 (Fdps)
Protein Information
| Accession | Q920E5 |
|---|---|
| Protein Names | Farnesyl pyrophosphate synthase (FPP synthase) (FPS) (EC 2.5.1.10) ((2E,6E)-farnesyl diphosphate synthase) (Cholesterol-regulated 39 kDa protein) (CR 39) (Dimethylallyltranstransferase) (EC 2.5.1.1) (Farnesyl diphosphate synthase) (Geranyltranstransferase) |
| Gene Symbol | Fdps |
| Organism | Mus musculus (Mouse) |
| Length | 353 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 34884899 37925639 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MNGNQKLDAY11NQEKQNFIQH21FSQIVKVLTE31KELGHPEIGD41AIARLKEVLE
51-10051YNALGGKYNR61GLTVVQAFQE71LVEPKKQDAE81SLQRALTVGW91CVELLQAFFL
101-150101VSDDIMDSSL111TRRGQICWYQ121KPGIGLDAIN131DALLLEASIY141RLLKFYCREQ
151-200151PYYLNLLELF161LQSSYQTEIG171QTLDLMTAPQ181GHVDLGRYTE191KRYKSIVKYK
201-250201TAFYSFYLPI211AAAMYMAGID221GEKEHANALK231ILMEMGEFFQ241VQDDYLDLFG
251-300251DPSVTGKVGT261DIQDNKCSWL271VVQCLLRASP281QQRQILEENY291GQKDPEKVAR
301-350301VKALYEALDL311QSAFFKYEED321SYNRLKSLIE331QCSAPLPPSI341FMELANKIYK
351-353351RRK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 91 | - | - | - |
Deep-Palm: 0.54
|
|
| 117 | - | - | - |
Deep-Palm: 0.63
|
|
| 147 | - | - | - |
Deep-Palm: 0.96
|
|
| 267 | - | - | - |
Deep-Palm: 0.85
|
|
| 274 | - | - | - |
Deep-Palm: 0.73
|
|
| 332 | - | - | - |
Deep-Palm: 0.91
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.800
4
Liver
Specificity: 0.800
4/4 (100.0%)
1
Raw 264.7
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.