Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q921F2 | Tardbp; Tdp43 | TAR DNA-binding protein 43 (TDP-43) | Mus musculus (Mouse) | 414 aa |
Protein Details: Q921F2 (Tardbp)
Protein Information
| Accession | Q921F2 |
|---|---|
| Protein Names | TAR DNA-binding protein 43 (TDP-43) |
| Gene Symbol | Tardbp; Tdp43 |
| Organism | Mus musculus (Mouse) |
| Length | 414 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 29575903 29733200 31772009 34884899 37925639 39008777 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.576
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
19
Liver tissue
Specificity: 0.576
19/19 (100.0%)
6
Liver membrane
Specificity: 0.182
6/6 (100.0%)
3
Brain tissue
Specificity: 0.091
3/12 (25.0%)
3
Neural Stem Cells
Specificity: 0.091
3/3 (100.0%)
2
Macrophage Raw 264.7
Specificity: 0.061
2/2 (100.0%)
0
Testis
Specificity: 0.000
0/2 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MSEYIRVTED11ENDEPIEIPS21EDDGTVLLST31VTAQFPGACG41LRYRNPVSQC
51-10051MRGVRLVEGI61LHAPDAGWGN71LVYVVNYPKD81NKRKMDETDA91SSAVKVKRAV
101-150101QKTSDLIVLG111LPWKTTEQDL121KDYFSTFGEV131LMVQVKKDLK141TGHSKGFGFV
151-200151RFTEYETQVK161VMSQRHMIDG171RWCDCKLPNS181KQSPDEPLRS191RKVFVGRCTE
201-250201DMTAEELQQF211FCQYGEVVDV221FIPKPFRAFA231FVTFADDKVA241QSLCGEDLII
251-300251KGISVHISNA261EPKHNSNRQL271ERSGRFGGNP281GGFGNQGGFG291NSRGGGAGLG
301-350301NNQGGNMGGG311MNFGAFSINP321AMMAAAQAAL331QSSWGMMGML341ASQQNQSGPS
351-400351GNNQSQGSMQ361REPNQAFGSG371NNSYSGSNSG381APLGWGSASN391AGSGSGFNGG
401-414401FGSSMDSKSS411GWGM
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 39 | Experimental | TAR DNA-binding protein 43 N-terminal domain | 39008777 |
| 50 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | TAR DNA-binding protein 43 N-terminal domain | 28526873 |
| 173 | Experimental | - | 39008777 |
| 175 | Experimental | - | 39008777 |
| 244 | Experimental CYSMODDB SWISSPALM DBPTM | - | 28526873 |