Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q922D8 | Mthfd1 | C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF synthase) … | Mus musculus (Mouse) | 935 aa |
Protein Details: Q922D8 (Mthfd1)
Protein Information
| Accession | Q922D8 |
|---|---|
| Protein Names | C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF synthase) [Cleaved into: C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed] [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)] |
| Gene Symbol | Mthfd1 |
| Organism | Mus musculus (Mouse) |
| Length | 935 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 34884899 35358180 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAPAGILNGK11LVSAQIRDRL21KNQVTRMQEQ31VPGFTPGLAI41LQVGDRDDSN
51-10051LYINVKLKAA61EEIGIKATHI71KLPRTSTESE81VLKYVISLNE91DASVHGFIVQ
101-150101LPLDSENSIN111TEAVINAIAP121EKDVDGLTSV131SAGKLARGDL141NDCFIPCTPK
151-200151GCLELIKEAG161VQIAGRHAVV171VGRSKIVGAP181MHDLLLWNNA191TVTTCHSKTA
201-250201NLDKEVNKGD211ILVVATGQPE221MVKGEWIKPG231AVVIDCGINY241VPDDTKPNGR
251-300251KVVGDVAYDE261AKERASFITP271VPGGVGPMTV281AMLMQSTVES291AQRFLQKFKP
301-350301GKWTIQYNKL311NLKTPVPSDI321AISRSCKPKL331IGNLAREIGL341LTEEVELYGE
351-400351TKAKVLLSAL361DRLKHQPDGK371YVVVTGITPT381PLGEGKSTTT391IGLVQALGAH
401-450401LRQNVFACVR411QPSQGPTFGI421KGGAAGGGYS431QVIPMEEFNL441HLTGDIHAIT
451-500451AANNLVAAAI461DARIFHELTQ471TDKALFNRLV481PSVNGIRKFS491DIQIRRLRRL
501-550501GIEKTDPTTL511TDDEINRFAR521LDIDPETITW531QRVLDTNDRF541LRKITIGQSP
551-600551TEKGHTRTAQ561FDISVASEIM571AVLALTSSLE581DMRERLGRMV591VASSKKGEPI
601-650601SCEDLGVSGA611LTVLMKDAIK621PNLMQTLEGT631PVFVHAGPFA641NIAHGNSSII
651-700651ADRIALKLVG661PEGFVVTEAG671FGADIGMEKF681FNIKCRYSGL691QPHVVVLVAT
701-750701VRALKMHGGG711PTVTAGLPLP721KAYTEEDLDL731VEKGFSNLRK741QIENARMFGV
751-800751PVVVAVNVFK761TDTDAELDLV771SRLSREHGAF781DAVKCTHWAE791GGQGALALAQ
801-850801AVQRASQAPS811SFQLLYDLKL821SIEDKIRIIA831QRIYGADDIE841LLPEAQNKAE
851-900851IYTKQGFGNL861PICMAKTHLS871LSHNPEQKGV881PTGFVLPIRD891IRASVGAGFL
901-935901YPLVGTMSTM911PGLPTRPCFY921DIDLDPETEQ931VNGLF
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 143 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
MLE
(39008777)
| - |
Deep-Palm: 0.98
|
| 147 | SWISSPALM DBPTM CYSMODDB | Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain |
Liver
(28526873)
MLE
(39008777)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.97
|
| 152 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.94
|
|
| 195 | SWISSPALM DBPTM CYSMODDB | Tetrahydrofolate dehydrogenase/cyclohydrolase NAD(P)-binding domain |
Liver
(28526873)
| - |
Deep-Palm: 0.52
|
| 236 | - | - | - |
Deep-Palm: 0.94
|
|
| 326 | - | - | - |
Deep-Palm: 0.96
|
|
| 408 | SWISSPALM DBPTM CYSMODDB | Formate--tetrahydrofolate ligase |
Liver
(28526873)
| - |
Deep-Palm: 0.93
|
| 602 | - | - | - |
Deep-Palm: 0.97
|
|
| 685 | - | - | - |
Deep-Palm: 0.58
|
|
| 785 | - | - | - |
Deep-Palm: 0.97
|
|
| 863 | SWISSPALM DBPTM CYSMODDB | Formate--tetrahydrofolate ligase |
Liver
(28526873)
| - |
Deep-Palm: 0.96
|
| 918 | - | - | - |
Deep-Palm: 0.41
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.714
5
Liver
Specificity: 0.714
5/5 (100.0%)
2
Brain
Specificity: 0.286
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.