Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q922Q8 | Lrrc59 | Leucine-rich repeat-containing protein 59 [Cleaved … | Mus musculus (Mouse) | 307 aa |
Protein Details: Q922Q8 (Lrrc59)
Protein Information
| Accession | Q922Q8 |
|---|---|
| Protein Names | Leucine-rich repeat-containing protein 59 [Cleaved into: Leucine-rich repeat-containing protein 59, N-terminally processed] |
| Gene Symbol | Lrrc59 |
| Organism | Mus musculus (Mouse) |
| Length | 307 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MTKAGSKGGN11LRDKLDGNEL21DLSLSDLNEV31PVKELAALPK41ATVLDLSCNK
51-10051LSTLPSDFCG61LTHLVKLDLS71KNKLQQLPAD81FGRLVNLQHL91DLLNNRLVTL
101-150101PVSFAQLKNL111KWLDLKDNPL121DPVLAKVAGD131CLDEKQCKQC141ANKVLQHMKA
151-200151VQADQERERQ161RRLEVEREAE171KKREAKQQAK181EAKERELRKR191EKAEEKERRR
201-250201KEYDAQKASK211REQEKKPKKE221ANQAPKSKSG231SRPRKPPPRK241HTRSWAVLKV
251-300251LLLLLLLCVA261GGLVVCRVTG271LHQQPLCTSV281NTIYDNAVQG291LRHHEILQWV
301-307301LQTDSQQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 48 | SWISSPALM DBPTM CYSMODDB | L domain-like Leucine rich repeat Leucine-rich repeat domain superfamily Leucine-rich repeat |
Liver
(28526873)
| - |
Deep-Palm: 0.98
|
| 59 | SWISSPALM DBPTM CYSMODDB | Leucine rich repeat |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.97
|
| 131 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.96
|
| 137 | - | - | - |
Deep-Palm: 0.85
|
|
| 140 | - | - | - |
Deep-Palm: 0.50
|
|
| 258 | - | - | - |
Deep-Palm: 0.99
|
|
| 266 | - | - | - |
Deep-Palm: 0.99
|
|
| 277 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.85
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
6
Liver
Specificity: 0.261
6/6 (100.0%)
2
Testis
Specificity: 0.087
2/2 (100.0%)
1
Brain
Specificity: 0.043
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.857
12
Brain tissue (Mass)
Specificity: 0.522
12/56 (21.4%)
2
Liver tissue (Mass)
Specificity: 0.087
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.