Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q925I8 | Pcdh10 | OL-protocadherin isoform (Protocadherin 10) | Mus musculus (Mouse) | 1040 aa |
Protein Details: Q925I8 (Pcdh10)
Protein Information
| Accession | Q925I8 |
|---|---|
| Protein Names | OL-protocadherin isoform (Protocadherin 10) |
| Gene Symbol | Pcdh10 |
| Organism | Mus musculus (Mouse) |
| Length | 1040 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31772009 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MIVLLFFALL11WMVDGVFSQL21HYTVQEEQEH31GTFVGNIAED41LGLDITKLSA
51-10051RRFQTVANSR61TPYLDLNLET71GVLYVNEKID81REQICKQSPS91CVLHLEVFLE
101-150101NPLELFRVEI111EVLDINDNPP121SFPEPDLTVE131ISESATPGTR141FPLESAFDPD
151-200151VGTNSLRDYE161ITPNSYFSLD171VQTQGDGNRF181AELVLEKPLD191REQQAVHRYV
201-250201LTAVDGGGGG211GGGEGGGGGG221GAGLPPQQQR231TGTALLTIRV241LDSNDNVPAF
251-300251DQPVYTVSLP261ENSPPGTLVI271QLNATDPDEG281QNGEVVYSFS291SHISPRAREL
301-350301FGLSPRTGRL311EVSGELDYEE321SPVYQVYVQA331KDLGPNAVPA341HCKVLVRVLD
351-400351ANDNAPEISF361STVKEAVSEG371AAPGTVVALF381SVTDRDSEEN391GQVQCELLGD
401-450401VPFRLKSSFK411NYYTIVTEAP421LDREAGDSYT431LTVVARDRGE441PALSTSKSIQ
451-500451VQVSDVNDNA461PRFSQPVYDV471YVTENNVPGA481YIYAVSATDR491DEGANAKLTY
501-550501SILECQIQGM511SVFTYVSINS521DNGYLYALRS531FDYEQIKDFS541FQVEARDAGS
551-600551PQALAGNATV561NILIVDQNDN571APAIVAPLPG581RNGTPAREVL591PRSAEPGYLL
601-650601TRVAAVDADD611GENARLTYSI621VRGNEMNLFR631LDWRTGELRT641ARRVPAKRDP
651-700651QRPYELVIEV661RDHGQPPLSS671TATLVVQLVD681GAVEPQGGGG691DRGGGSGEHL
701-750701RPSRSGGGET711SLDLTLILII721ALGSVSFIFL731LAMIVLAVRC741QKEKKLNIYT
751-800751CLASDCCLCC761CCCGNGSSTC771CGRQARARKK781KLSKSDIMLV791QSANVPSNPA
801-850801QVPVEESGGF811GSHHHNQNYC821YQVCLTPESA831KTDLMFLKPC841SPSRSTDAEH
851-900851NPCGAIVTGY861SDQQPDIISN871GSILSNENKH881QRAELSYLVD891RPRRVNSSAF
901-950901QEADIVSSKD911SGHGDSEQGD921SDHDVTNRGQ931SAGMDLFSNC941TEECKALGHS
951-1000951DRCWMPSFVP961SDGRQAADYR971SNLHVPGMDS981VPDTEVFEPP991EVQPGAERSF
1001-10401001STFGKEKALH1011GTLERKELDG1021LLSNTRAPYK1031PPYLTRKRIC
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 85 | - | - | - |
Deep-Palm: 0.46
|
|
| 91 | - | - | - |
Deep-Palm: 0.86
|
|
| 342 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.84
|
|
| 395 | - | - | - |
Deep-Palm: 0.59
|
|
| 505 | - | - | - |
Deep-Palm: 0.62
|
|
| 740 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.95
|
|
| 751 | - | - | - |
Deep-Palm: 0.25
|
|
| 756 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.06
|
|
| 757 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.06
|
|
| 759 | - | - | - |
Deep-Palm: 0.06
|
|
| 760 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.09
|
|
| 761 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.12
|
|
| 762 | - | - | - |
Deep-Palm: 0.14
|
|
| 763 | - | - | - |
Deep-Palm: 0.20
|
|
| 770 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.40
|
|
| 771 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.48
|
|
| 820 | - | - | - |
Deep-Palm: 0.02
|
|
| 824 | - | - | - |
Deep-Palm: 0.03
|
|
| 840 | SWISSPALM DBPTM CYSMODDB | Cadherin cytoplasmic C-terminal |
Forebrain
(28680068)
| - |
Deep-Palm: 0.87
|
| 853 | - | - | - |
Deep-Palm: 0.38
|
|
| 940 | - | - | - |
Deep-Palm: 0.20
|
|
| 944 | - | - | - |
Deep-Palm: 0.13
|
|
| 953 | - | - | - |
Deep-Palm: 0.17
|
|
| 1040 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
NSC
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.