Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q925Q3 | Slc8b1 | Mitochondrial sodium/calcium exchanger protein (Na(+)/K(+)/Ca(2+)-exchange … | Mus musculus (Mouse) | 585 aa |
Protein Details: Q925Q3 (Slc8b1)
Protein Information
| Accession | Q925Q3 |
|---|---|
| Protein Names | Mitochondrial sodium/calcium exchanger protein (Na(+)/K(+)/Ca(2+)-exchange protein 6) (Sodium/calcium exchanger protein, mitochondrial) (Sodium/potassium/calcium exchanger 6) (Solute carrier family 24 member 6) (Solute carrier family 8 member B1) |
| Gene Symbol | Slc8b1 |
| Organism | Mus musculus (Mouse) |
| Length | 585 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASRWLALLW11APVFLCVALI21LETASGTGDP31STKAHGHIQF41SAGSVNQTAM
51-10051ADCRAVCGLN61TSDRCDFVRR71NPDCRSEAGY81LDYLEGIFCY91FPPNLLPLAI
101-150101TLYVFWLLYL111FLILGVTAAK121FFCPNLSAIS131TNLKLSHNVA141GVTFLAFGNG
151-200151APDIFSALVA161FSDPRTAGLA171IGALFGAGVL181VTTVVAGGIT191ILHPFMAASR
201-250201PFLRDIAFYM211VAVFLTFTAL221YLGRITLTWA231LGYLGLYVFY241VVTVIICTWV
251-300251YQRQRSRSLV261HSISETPELL271SESEEDQMSS281NTNSYDYGDE291YRPLLLGRET
301-350301TVQILIQALN311PLDYRKWRTQ321SISWRVLKVV331KLPVEFLLLL341TVPVVDPDKD
351-400351DRNWKRPLNC361LQLVISPLVL371VLTLQSGVYG381IYEIGGLLPV391WAVVVIVGTA
401-450401LASVTFFATS411NREPPRLHWL421FAFLGFLTSA431LWINAAATEV441VNILRSLGVI
451-500451FRLSNTVLGL461TLLAWGNSIG471DAFSDFTLAR481QGYPRMAFSA491CFGGIIFNIL
501-550501VGVGLGCLLQ511IIRNHVVEVK521LEPDGLLVWV531LASALGLSLI541FSLVSVPLQC
551-585551FQLSKAYGLC561LLLFYICFLV571VVLLTEFGVI581HLKKA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 16 | - | - | - |
Deep-Palm: 0.98
|
|
| 53 | - | - | - |
Deep-Palm: 0.37
|
|
| 57 | - | - | - |
Deep-Palm: 0.47
|
|
| 65 | - | - | - |
Deep-Palm: 0.40
|
|
| 74 | - | - | - |
Deep-Palm: 0.76
|
|
| 89 | - | - | - |
Deep-Palm: 0.88
|
|
| 123 | SWISSPALM DBPTM CYSMODDB | Sodium/calcium exchanger protein |
Liver
(28526873)
| - |
Deep-Palm: 0.95
|
| 247 | - | - | - |
Deep-Palm: 0.74
|
|
| 360 | - | - | - |
Deep-Palm: 0.97
|
|
| 491 | - | - | - |
Deep-Palm: 0.94
|
|
| 507 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.95
|
|
| 550 | - | - | - |
Deep-Palm: 0.97
|
|
| 560 | - | - | - |
Deep-Palm: 0.77
|
|
| 567 | - | - | - |
Deep-Palm: 0.81
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Liver
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.