Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q92688 | ANP32B | Acidic leucine-rich nuclear phosphoprotein 32 … | Homo sapiens (Human) | 251 aa |
Protein Details: Q92688 (ANP32B)
Protein Information
| Accession | Q92688 |
|---|---|
| Protein Names | Acidic leucine-rich nuclear phosphoprotein 32 family member B (Acidic protein rich in leucines) (Putative HLA-DR-associated protein I-2) (PHAPI2) (Silver-stainable protein SSP29) |
| Gene Symbol | ANP32B |
| Organism | Homo sapiens (Human) |
| Length | 251 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDMKRRIHLE11LRNRTPAAVR21ELVLDNCKSN31DGKIEGLTAE41FVNLEFLSLI
51-10051NVGLISVSNL61PKLPKLKKLE71LSENRIFGGL81DMLAEKLPNL91THLNLSGNKL
101-150101KDISTLEPLK111KLECLKSLDL121FNCEVTNLND131YRESVFKLLP141QLTYLDGYDR
151-200151EDQEAPDSDA161EVDGVDEEEE171DEEGEDEEDE181DDEDGEEEEF191DEEDDEDEDV
201-250201EGDEDDDEVS211EEEEEFGLDE221EDEDEDEDEE231EEEGGKGEKR241KRETDDEGED
251-251251D
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 27 | Leucine-rich repeat domain superfamily Acidic leucine-rich nuclear phosphoprotein 32 | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.97
|
|
| 114 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.98
|
|
| 123 | SWISSPALM DBPTM CYSMODDB | Leucine Rich repeats (2 copies) |
SW480 cell line
(26865113)
|
Unknown
(32651440)
|
GPS-Palm: 0.76
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
1
HAP1 cell
Specificity: 0.500
1/1 (100.0%)
1
293T cell
Specificity: 0.500
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 144 | Y → C | 0.002288 | SNP | Missense Mutation | STAD |
| 237 | G → C | 0.001887 | SNP | Missense Mutation | UCEC |