Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q92901 | RPL3L | Ribosomal protein uL3-like (60S ribosomal … | Homo sapiens (Human) | 407 aa |
Protein Details: Q92901 (RPL3L)
Protein Information
| Accession | Q92901 |
|---|---|
| Protein Names | Ribosomal protein uL3-like (60S ribosomal protein L3-like) (Large ribosomal subunit protein uL3-like) |
| Gene Symbol | RPL3L |
| Organism | Homo sapiens (Human) |
| Length | 407 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29575903 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSHRKFSAPR11HGHLGFLPHK21RSHRHRGKVK31TWPRDDPSQP41VHLTAFLGYK
51-10051AGMTHTLREV61HRPGLKISKR71EEVEAVTIVE81TPPLVVVGVV91GYVATPRGLR
101-150101SFKTIFAEHL111SDECRRRFYK121DWHKSKKKAF131TKACKRWRDT141DGKKQLQKDF
151-200151AAMKKYCKVI161RVIVHTQMKL171LPFRQKKAHI181MEIQLNGGTV191AEKVAWAQAR
201-250201LEKQVPVHSV211FSQSEVIDVI221AVTKGRGVKG231VTSRWHTKKL241PRKTHKGLRK
251-300251VACIGAWHPA261RVGCSIARAG271QKGYHHRTEL281NKKIFRIGRG291PHMEDGKLVK
301-350301NNASTSYDVT311AKSITPLGGF321PHYGEVNNDF331VMLKGCIAGT341KKRVITLRKS
351-400351LLVHHSRQAV361ENIELKFIDT371TSKFGHGRFQ381TAQEKRAFMG391PQKKHLEKET
401-407401PETSGDL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 114 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.85
|
|
| 134 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.60
|
|
| 157 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.73
|
|
| 253 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein L3 | - |
cerebral cortex
(36430497)
|
GPS-Palm: 0.92
Deep-Palm: 0.97
|
| 264 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.91
|
|
| 336 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.95
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
HeLa cell
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 114 | C → Y | 0.002506 | SNP | Missense Mutation | COAD |
| 116 | R → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 286 | R → C | 0.002506 | SNP | Missense Mutation | COAD |