Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q96BY7 | ATG2B | Autophagy-related protein 2 homolog B | Homo sapiens (Human) | 2078 aa |
Protein Details: Q96BY7 (ATG2B)
Protein Information
| Accession | Q96BY7 |
|---|---|
| Protein Names | Autophagy-related protein 2 homolog B |
| Gene Symbol | ATG2B |
| Organism | Homo sapiens (Human) |
| Length | 2078 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPWPFSESIK11KRACRYLLQR21YLGHFLQEKL31SLEQLSLDLY41QGTGSLAQVP
51-10051LDKWCLNEIL61ESADAPLEVT71EGFIQSISLS81VPWGSLLQDN91CALEVRGLEM
101-150101VFRPRPRPAT111GSEPMYWSSF121MTSSMQLAKE131CLSQKLTDEQ141GEGSQPFEGL
151-200151EKFAETIETV161LRRVKVTFID171TVLRIEHVPE181NSKTGTALEI191RIERTVYCDE
201-250201TADESSGINV211HQPTAFAHKL221LQLSGVSLFW231DEFSASAKSS241PVCSTAPVET
251-300251EPKLSPSWNP261KIIYEPHPQL271TRNLPEIAPS281DPVQIGRLIG291RLELSLTLKQ
301-350301NEVLPGAKLD311VDGQIDSIHL321LLSPRQVHLL331LDMLAAIAGP341ENSSKIGLAN
351-400351KDRKNRPMQQ361EDEYRIQMEL371NRYYLRKDSL381SVGVSSEQSF391YETETARTPS
401-450401SREEEVFFSM411ADMDMSHSLS421SLPPLGDPPN431MDLELSLTST441YTNTPAGSPL
451-500451SATVLQPTWG461EFLDHHKEQP471VRGSTFPSNL481VHPTPLQKTS491LPSRSVSVDE
501-550501SRPELIFRLA511VGTFSISVLH521IDPLSPPETS531QNLNPLTPMA541VAFFTCIEKI
551-600551DPARFSTEDF561KSFRAVFAEA571CSHDHLRFIG581TGIKVSYEQR591QRSASRYFST
601-650601DMSIGQMEFL611ECLFPTDFHS621VPPHYTELLT631FHSKEETGSH641SPVCLQLHYK
651-700651HSENRGPQGN661QARLSSVPHK671AELQIKLNPV681CCELDISIVD691RLNSLLQPQK
701-750701LATVEMMASH711MYTSYNKHIS721LHKAFTEVFL731DDSHSPANCR741ISVQVATPAL
751-800751NLSVRFPIPD761LRSDQERGPW771FKKSLQKEIL781YLAFTDLEFK791TEFIGGSTPE
801-850801QIKLELTFRE811LIGSFQEEKG821DPSIKFFHVS831SGVDGDTTSS841DDFDWPRIVL
851-900851KINPPAMHSI861LERIAAEEEE871ENDGHYQEEE881EGGAHSLKDV891CDLRRPAPSP
901-950901FSSRRVMFEN911EQMVMPGDPV921EMTEFQDKAI931SNSHYVLELT941LPNIYVTLPN
951-1000951KSFYEKLYNR961IFNDLLLWEP971TAPSPVETFE981NISYGIGLSV991ASQLINTFNK
1001-10501001DSFSAFKSAV1011HYDEESGSEE1021ETLQYFSTVD1031PNYRSRRKKK1041LDSQNKNSQS
1051-11001051FLSVLLNINH1061GLIAVFTDVK1071QDNGDLLENK1081HGEFWLEFNS1091GSLFCVTKYE
1101-11501101GFDDKHYICL1111HSSSFSLYHK1121GIVNGVILPT1131ETRLPSSTRP1141HWLEPTIYSS
1151-12001151EEDGLSKTSS1161DGVGGDSLNM1171LSVAVKILSD1181KSESNTKEFL1191IAVGLKGATL
1201-12501201QHRMLPSGLS1211WHEQILYFLN1221IADEPVLGYN1231PPTSFTTFHV1241HLWSCALDYR
1251-13001251PLYLPIRSLL1261TVETFSVSSS1271VALDKSSSTL1281RIILDEAALH1291LSDKCNTVTI
1301-13501301NLSRDYVRVM1311DMGLLELTIT1321AVKSDSDGEQ1331TEPRFELHCS1341SDVVHIRTCS
1351-14001351DSCAALMNLI1361QYIASYGDLQ1371TPNKADMKPG1381AFQRRSKVDS1391SGRSSSRGPV
1401-14501401LPEADQQMLR1411DLMSDAMEEI1421DMQQGTSSVK1431PQANGVLDEK1441SQIQEPCCSD
1451-15001451LFLFPDESGN1461VSQESGPTYA1471SFSHHFISDA1481MTGVPTENDD1491FCILFAPKAA
1501-15501501MQEKEEEPVI1511KIMVDDAIVI1521RDNYFSLPVN1531KTDTSKAPLH1541FPIPVIRYVV
1551-16001551KEVSLVWHLY1561GGKDFGIVPP1571TSPAKSYISP1581HSSPSHTPTR1591HGRNTVCGGK
1601-16501601GRNHDFLMEI1611QLSKVKFQHE1621VYPPCKPDCD1631SSLSEHPVSR1641QVFIVQDLEI
1651-17001651RDRLATSQMN1661KFLYLYCSKE1671MPRKAHSNML1681TVKALHVCPE1691SGRSPQECCL
1701-17501701RVSLMPLRLN1711IDQDALFFLK1721DFFTSLSAEV1731ELQMTPDPEV1741KKSPGADVTC
1751-18001751SLPRHLSTSK1761EPNLVISFSG1771PKQPSQNDSA1781NSVEVVNGME1791EKNFSAEEAS
1801-18501801FRDQPVFFRE1811FRFTSEVPIR1821LDYHGKHVSM1831DQGTLAGILI1841GLAQLNCSEL
1851-19001851KLKRLSYRHG1861LLGVDKLFSY1871AITEWLNDIK1881KNQLPGILGG1891VGPMHSLVQL
1901-19501901VQGLKDLVWL1911PIEQYRKDGR1921IVRGFQRGAA1931SFGTSTAMAA1941LELTNRMVQT
1951-20001951IQAAAETAYD1961MVSPGTLSIE1971PKKTKRFPHH1981RLAHQPVDLR1991EGVAKAYSVV
2001-20502001KEGITDTAQT2011IYETAAREHE2021SRGVTGAVGE2031VLRQIPPAVV2041KPLIVATEAT
2051-20782051SNVLGGMRNQ2061IRPDVRQDES2071QKWRHGDD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 14 | Autophagy-related protein 2 | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.90
|
|
| 55 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.96
|
|
| 91 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.91
|
|
| 131 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.81
|
|
| 198 | - | - | - |
Deep-Palm: 0.70
|
|
| 243 | - | - | - |
GPS-Palm: 0.69
Deep-Palm: 0.91
|
|
| 546 | - |
HeLa
(37611173)
| - |
GPS-Palm: 0.80
Deep-Palm: 0.58
|
|
| 571 | - | - | - |
GPS-Palm: 0.65
Deep-Palm: 0.88
|
|
| 612 | - | - | - |
Deep-Palm: 0.06
|
|
| 644 | - | - | - |
Deep-Palm: 0.55
|
|
| 681 | - | - | - |
Deep-Palm: 0.79
|
|
| 682 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.74
|
|
| 739 | - | - | - |
Deep-Palm: 0.86
|
|
| 891 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.89
|
|
| 1095 | - | - | - |
Deep-Palm: 0.10
|
|
| 1109 | - | - | - |
Deep-Palm: 0.16
|
|
| 1245 | - | - | - |
Deep-Palm: 0.66
|
|
| 1295 | - | - | - |
Deep-Palm: 0.86
|
|
| 1339 | - | - | - |
Deep-Palm: 0.12
|
|
| 1349 | - | - | - |
Deep-Palm: 0.04
|
|
| 1353 | - | - | - |
Deep-Palm: 0.03
|
|
| 1447 | - | - | - |
Deep-Palm: 0.47
|
|
| 1448 | - | - | - |
Deep-Palm: 0.54
|
|
| 1492 | - | - | - |
Deep-Palm: 0.74
|
|
| 1597 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.29
|
|
| 1625 | - |
HeLa
(37611173)
| - |
Deep-Palm: 0.33
|
|
| 1629 | - |
HeLa
(37611173)
| - |
Deep-Palm: 0.34
|
|
| 1667 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.44
|
|
| 1688 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.70
|
|
| 1698 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.77
|
|
| 1699 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.72
|
|
| 1750 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.93
|
|
| 1847 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 14 | C → Afs*17 | 0.002427 | DEL | Frame Shift Del | BLCA |
| 107 | R → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 131 | C → C | 0.002288 | SNP | Silent | STAD |
| 343 | S → C | 0.010870 | SNP | Missense Mutation | ACC |
| 753 | S → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 755 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 770 | W → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 826 | F → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1043 | S → C | 0.003460 | SNP | Missense Mutation | CESC |
| 1094 | F → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1238 | F → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1308 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 1340 | S → C | 0.002294 | SNP | Missense Mutation | OV |
| 1362 | Y → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 1547 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1622 | Y → C | 0.005618 | SNP | Missense Mutation | PAAD |
| 1625 | C → Y | 0.001887 | SNP | Missense Mutation | UCEC |
| 1653 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1662 | F → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1688 | C → Y | 0.001887 | SNP | Missense Mutation | UCEC |
| 2074 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 2074 | R → C | 0.005435 | SNP | Missense Mutation | ESCA |