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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
Q96D46 NMD3; CGI-07 60S ribosomal export protein NMD3 … Homo sapiens (Human) 503 aa

Protein Details: Q96D46 (NMD3)

Protein Information
Accession Q96D46
Protein Names 60S ribosomal export protein NMD3 (hNMD3)
Gene Symbol NMD3; CGI-07
Organism Homo sapiens (Human)
Length 503 aa
Isoforms No isoforms
Related PMIDs 29733200
Database Sources No database sources
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
4
293T cells
Specificity: 1.000
4/10 (40.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
LNCaP cells
Specificity: 0.000
0/46 (0.0%)
0
PC3 cells
Specificity: 0.000
0/4 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MEYMAESTDR11SPGHILCCEC21GVPISPNPAN31ICVACLRSKV41DISQGIPKQV
51-10051SISFCKQCQR61YFQPPGTWIQ71CALESRELLA81LCLKKIKAPL91SKVRLVDAGF
101-150101VWTEPHSKRL111KVKLTIQKEV121MNGAILQQVF131VVDYVVQSQM141CGDCHRVEAK
151-200151DFWKAVIQVR161QKTLHKKTFY171YLEQLILKYG181MHQNTLRIKE191IHDGLDFYYS
201-250201SKQHAQKMVE211FLQCTVPCRY221KASQRLISQD231IHSNTYNYKS241TFSVEIVPIC
251-300251KDNVVCLSPK261LAQSLGNMNQ271ICVCIRVTSA281IHLIDPNTLQ291VADIDGSTFW
301-350301SHPFNSLCHP311KQLEEFIVME321CSIVQDIKRA331AGAGMISKKH341TLGEVWVQKT
351-400351SEMNTDKQYF361CRTHLGHLLN371PGDLVLGFDL381ANCNLNDEHV391NKMNSDRVPD
401-450401VVLIKKSYDR411TKRQRRRNWK421LKELAREREN431MDTDDERQYQ441DFLEDLEEDE
451-500451AIRKNVNIYR461DSAIPVESDT471DDEGAPRISL481AEMLEDLHIS491QDATGEEGAS
501-503501MLT
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
32 Prediction (Medium) - -
35 Prediction (Medium) - -
55 Prediction (Medium) - -
58 Prediction (Medium) - -
82 Prediction (High) - -
214 Prediction (High) - -
218 Prediction (High) - -
256 Prediction (Low) - -
272 Prediction (Medium) - -
274 Prediction (Medium) - -
321 Prediction (Medium) - -
383 Prediction (Low) - -
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
35 C → G 0.002747 SNP Missense Mutation LIHC
68 W → C 0.002033 SNP Missense Mutation LUSC
141 C → C 0.001887 SNP Silent UCEC
187 R → C 0.002141 SNP Missense Mutation SKCM
187 R → C 0.001887 SNP Missense Mutation UCEC
321 C → C 0.002747 SNP Silent LIHC
361 C → Vfs*9 0.002288 DEL Frame Shift Del STAD