Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q96NW4 | ANKRD27 | Ankyrin repeat domain-containing protein 27 … | Homo sapiens (Human) | 1050 aa |
Protein Details: Q96NW4 (ANKRD27)
Protein Information
| Accession | Q96NW4 |
|---|---|
| Protein Names | Ankyrin repeat domain-containing protein 27 (VPS9 domain-containing protein) |
| Gene Symbol | ANKRD27 |
| Organism | Homo sapiens (Human) |
| Length | 1050 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 31382980 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MALYDEDLLK11NPFYLALQKC21RPDLCSKVAQ31IHGIVLVPCK41GSLSSSIQST
51-10051CQFESYILIP61VEEHFQTLNG71KDVFIQGNRI81KLGAGFACLL91SVPILFEETF
101-150101YNEKEESFSI111LCIAHPLEKR121ESSEEPLAPS131DPFSLKTIED141VREFLGRHSE
151-200151RFDRNIASFH161RTFRECERKS171LRHHIDSANA181LYTKCLQQLL191RDSHLKMLAK
201-250201QEAQMNLMKQ211AVEIYVHHEI221YNLIFKYVGT231MEASEDAAFN241KITRSLQDLQ
251-300251QKDIGVKPEF261SFNIPRAKRE271LAQLNKCTSP281QQKLVCLRKV291VQLITQSPSQ
301-350301RVNLETMCAD311DLLSVLLYLL321VKTEIPNWMA331NLSYIKNFRF341SSLAKDELGY
351-400351CLTSFEAAIE361YIRQGSLSAK371PPESEGFGDR381LFLKQRMSLL391SQMTSSPTDC
401-450401LFKHIASGNQ411KEVERLLSQE421DHDKDTVQKM431CHPLCFCDDC441EKLVSGRLND
451-500451PSVVTPFSRD461DRGHTPLHVA471AVCGQASLID481LLVSKGAMVN491ATDYHGATPL
501-550501HLACQKGYQS511VTLLLLHYKA521SAEVQDNNGN531TPLHLACTYG541HEDCVKALVY
551-600551YDVESCRLDI561GNEKGDTPLH571IAARWGYQGV581IETLLQNGAS591TEIQNRLKET
601-650601PLKCALNSKI611LSVMEAYHLS621FERRQKSSEA631PVQSPQRSVD641SISQESSTSS
651-700651FSSMSASSRQ661EETKKDYREV671EKLLRAVADG681DLEMVRYLLE691WTEEDLEDAE
701-750701DTVSAADPEF711CHPLCQCPKC721APAQKRLAKV731PASGLGVNVT741SQDGSSPLHV
751-800751AALHGRADLI761PLLLKHGANA771GARNADQAVP781LHLACQQGHF791QVVKCLLDSN
801-850801AKPNKKDLSG811NTPLIYACSG821GHHELVALLL831QHGASINASN841NKGNTALHEA
851-900851VIEKHVFVVE861LLLLHGASVQ871VLNKRQRTAV881DCAEQNSKIM891ELLQVVPSCV
901-950901ASLDDVAETD911RKEYVTVKIR921KKWNSKLYDL931PDEPFTRQFY941FVHSAGQFKG
951-1000951KTSREIMARD961RSVPNLTEGS971LHEPGRQSVT981LRQNNLPAQS991GSHAAEKGNS
1001-10501001DWPERPGLTQ1011TGPGHRRMLR1021RHTVEDAVVS1031QGPEAAGPLS1041TPQEVSASRS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 20 | UPF0507/Ankyrin repeat domain-containing protein 27 | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.93
|
|
| 25 | UPF0507/Ankyrin repeat domain-containing protein 27 | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.73
|
|
| 39 | UPF0507/Ankyrin repeat domain-containing protein 27 | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.62
|
|
| 51 | UPF0507/Ankyrin repeat domain-containing protein 27 | - | - |
Deep-Palm: 0.47
|
|
| 88 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.92
|
|
| 112 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.88
|
|
| 166 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.72
|
|
| 185 | - | - | - |
Deep-Palm: 0.89
|
|
| 277 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.97
|
|
| 286 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.95
|
|
| 308 | - | - | - |
Deep-Palm: 0.88
|
|
| 351 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.94
|
|
| 400 | - | - | - |
Deep-Palm: 0.89
|
|
| 431 | - | - | - |
Deep-Palm: 0.10
|
|
| 435 | - | - | - |
Deep-Palm: 0.06
|
|
| 437 | - | - | - |
Deep-Palm: 0.09
|
|
| 440 | - | - | - |
Deep-Palm: 0.14
|
|
| 473 | - | - | - |
Deep-Palm: 0.97
|
|
| 504 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.89
|
|
| 537 | - | - | - |
Deep-Palm: 0.34
|
|
| 544 | - | - | - |
Deep-Palm: 0.27
|
|
| 556 | - | - | - |
Deep-Palm: 0.42
|
|
| 604 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.95
|
|
| 711 | - | - | - |
Deep-Palm: 0.34
|
|
| 715 | - | - | - |
Deep-Palm: 0.58
|
|
| 717 | - | - | - |
Deep-Palm: 0.53
|
|
| 720 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.82
|
|
| 785 | - | - | - |
Deep-Palm: 0.96
|
|
| 795 | - | - | - |
Deep-Palm: 0.79
|
|
| 818 | - | - | - |
Deep-Palm: 0.96
|
|
| 882 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.92
|
|
| 899 | - | - | - |
GPS-Palm: 0.65
Deep-Palm: 0.89
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
1
LNCaP
Specificity: 0.500
1/1 (100.0%)
1
U937 cell
Specificity: 0.500
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 39 | C → R | 0.001887 | SNP | Missense Mutation | UCEC |
| 266 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 431 | C → Y | 0.002288 | SNP | Missense Mutation | STAD |
| 431 | C → R | 0.001887 | SNP | Missense Mutation | UCEC |
| 504 | C → R | 0.001887 | SNP | Missense Mutation | UCEC |
| 574 | R → C | 0.003460 | SNP | Missense Mutation | CESC |
| 612 | S → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 715 | C → C | 0.002141 | SNP | Silent | SKCM |