Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q96P11-3 | NSUN5 | 28S rRNA (cytosine-C(5))-methyltransferase (EC 2.1.1.-) … | Homo sapiens (Human) | 324 aa |
Protein Details: Q96P11-3 (NSUN5)
Protein Information
| Accession | Q96P11-3 |
|---|---|
| Protein Names | 28S rRNA (cytosine-C(5))-methyltransferase (EC 2.1.1.-) (NOL1-related protein) (NOL1R) (NOL1/NOP2/Sun domain family member 5) (Williams-Beuren syndrome chromosomal region 20A protein) |
| Gene Symbol | NSUN5 |
| Organism | Homo sapiens (Human) |
| Length | 324 aa |
| Isoforms | |
| Related PMIDs | 31251020 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLRAFLFLSL11FPHSQVLVYE21LLLGKGFRGG31GGRWKALLGR41HQARLKAELA
51-10051RLKVHRGVSR61NEDLLEVGSR71PGPASQLPRF81VRVNTLKTCS91DDVVDYFKRQ
101-150101GFSYQGRASS111LDDLRALKGK121HFLLDPLMPE131LLVFPAQTDL141HEHPLYRAGH
151-200151LILQDRASCL161PAMLLDPPPG171SHVIDACAAP181GNKTSHLAAL191LKNQGSLPLT
201-250201WMPSGWHPWP211RCWPGLASLA221VNWLRRTSWR231SPPRIHATMR241STTSCWILPA
251-300251VARVCRADSW261RSPGQAHLAR271CVCMPWQGSS281SEPCATRSLS291LPCSGSSTPR
301-324301APSARRRMKT311WCEMRCSRTR321APSG
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 41 | - | - | - |
Deep-Palm: 0.82
|
|
| 146 | - | - | - |
Deep-Palm: 0.91
|
|
| 216 | - | - | - |
Deep-Palm: 0.96
|
|
| 234 | - | - | - |
Deep-Palm: 0.96
|
|
| 278 | - | - | - |
Deep-Palm: 0.98
|
|
| 279 | - | - | - |
Deep-Palm: 0.98
|
|
| 308 | - | - | - |
Deep-Palm: 0.77
|
|
| 343 | - | - | - |
Deep-Palm: 0.98
|
|
| 359 | - | - | - |
Deep-Palm: 0.95
|
|
| 362 | - | - | - |
Deep-Palm: 0.92
|
|
| 404 | - | - | - |
Deep-Palm: 0.90
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
LNCaP
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 158 | G → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 216 | C → Y | 0.001887 | SNP | Missense Mutation | UCEC |
| 330 | R → C | 0.002506 | SNP | Missense Mutation | COAD |