Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q96QT4 | TRPM7 | Transient receptor potential cation channel … | Homo sapiens (Human) | 1865 aa |
Protein Details: Q96QT4 (TRPM7)
Protein Information
| Accession | Q96QT4 |
|---|---|
| Protein Names | Transient receptor potential cation channel subfamily M member 7 (EC 2.7.11.1) (Channel-kinase 1) (Long transient receptor potential channel 7) (LTrpC-7) (LTrpC7) [Cleaved into: TRPM7 kinase, cleaved form (M7CK); TRPM7 channel, cleaved form] |
| Gene Symbol | TRPM7 |
| Organism | Homo sapiens (Human) |
| Length | 1865 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSQKSWIEST11LTKRECVYII21PSSKDPHRCL31PGCQICQQLV41RCFCGRLVKQ
51-10051HACFTASLAM61KYSDVKLGDH71FNQAIEEWSV81EKHTEQSPTD91AYGVINFQGG
101-150101SHSYRAKYVR111LSYDTKPEVI121LQLLLKEWQM131ELPKLVISVH141GGMQKFELHP
151-200151RIKQLLGKGL161IKAAVTTGAW171ILTGGVNTGV181AKHVGDALKE191HASRSSRKIC
201-250201TIGIAPWGVI211ENRNDLVGRD221VVAPYQTLLN231PLSKLNVLNN241LHSHFILVDD
251-300251GTVGKYGAEV261RLRRELEKTI271NQQRIHARIG281QGVPVVALIF291EGGPNVILTV
301-350301LEYLQESPPV311PVVVCEGTGR321AADLLAYIHK331QTEEGGNLPD341AAEPDIISTI
351-400351KKTFNFGQNE361ALHLFQTLME371CMKRKELITV381FHIGSDEHQD391IDVAILTALL
401-450401KGTNASAFDQ411LILTLAWDRV421DIAKNHVFVY431GQQWLVGSLE441QAMLDALVMD
451-500451RVAFVKLLIE461NGVSMHKFLT471IPRLEELYNT481KQGPTNPMLF491HLVRDVKQGN
501-550501LPPGYKITLI511DIGLVIEYLM521GGTYRCTYTR531KRFRLIYNSL541GGNNRRSGRN
551-600551TSSSTPQLRK561SHESFGNRAD571KKEKMRHNHF581IKTAQPYRPK591IDTVMEEGKK
601-650601KRTKDEIVDI611DDPETKRFPY621PLNELLIWAC631LMKRQVMARF641LWQHGEESMA
651-700651KALVACKIYR661SMAYEAKQSD671LVDDTSEELK681QYSNDFGQLA691VELLEQSFRQ
701-750701DETMAMKLLT711YELKNWSNST721CLKLAVSSRL731RPFVAHTCTQ741MLLSDMWMGR
751-800751LNMRKNSWYK761VILSILVPPA771ILLLEYKTKA781EMSHIPQSQD791AHQMTMDDSE
801-850801NNFQNITEEI811PMEVFKEVRI821LDSNEGKNEM831EIQMKSKKLP841ITRKFYAFYH
851-900851APIVKFWFNT861LAYLGFLMLY871TFVVLVQMEQ881LPSVQEWIVI891AYIFTYAIEK
901-950901VREIFMSEAG911KVNQKIKVWF921SDYFNISDTI931AIISFFIGFG941LRFGAKWNFA
951-1000951NAYDNHVFVA961GRLIYCLNII971FWYVRLLDFL981AVNQQAGPYV991MMIGKMVANM
1001-10501001FYIVVIMALV1011LLSFGVPRKA1021ILYPHEAPSW1031TLAKDIVFHP1041YWMIFGEVYA
1051-11001051YEIDVCANDS1061VIPQICGPGT1071WLTPFLQAVY1081LFVQYIIMVN1091LLIAFFNNVY
1101-11501101LQVKAISNIV1111WKYQRYHFIM1121AYHEKPVLPP1131PLIILSHIVS1141LFCCICKRRK
1151-12001151KDKTSDGPKL1161FLTEEDQKKL1171HDFEEQCVEM1181YFNEKDDKFH1191SGSEERIRVT
1201-12501201FERVEQMCIQ1211IKEVGDRVNY1221IKRSLQSLDS1231QIGHLQDLSA1241LTVDTLKTLT
1251-13001251AQKASEASKV1261HNEITRELSI1271SKHLAQNLID1281DGPVRPSVWK1291KHGVVNTLSS
1301-13501301SLPQGDLESN1311NPFHCNILMK1321DDKDPQCNIF1331GQDLPAVPQR1341KEFNFPEAGS
1351-14001351SSGALFPSAV1361SPPELRQRLH1371GVELLKIFNK1381NQKLGSSSTS1391IPHLSSPPTK
1401-14501401FFVSTPSQPS1411CKSHLETGTK1421DQETVCSKAT1431EGDNTEFGAF1441VGHRDSMDLQ
1451-15001451RFKETSNKIK1461ILSNNNTSEN1471TLKRVSSLAG1481FTDCHRTSIP1491VHSKQAEKIS
1501-15501501RRPSTEDTHE1511VDSKAALIPD1521WLQDRPSNRE1531MPSEEGTLNG1541LTSPFKPAMD
1551-16001551TNYYYSAVER1561NNLMRLSQSI1571PFTPVPPRGE1581PVTVYRLEES1591SPNILNNSMS
1601-16501601SWSQLGLCAK1611IEFLSKEEMG1621GGLRRAVKVQ1631CTWSEHDILK1641SGHLYIIKSF
1651-17001651LPEVVNTWSS1661IYKEDTVLHL1671CLREIQQQRA1681AQKLTFAFNQ1691MKPKSIPYSP
1701-17501701RFLEVFLLYC1711HSAGQWFAVE1721ECMTGEFRKY1731NNNNGDEIIP1741TNTLEEIMLA
1751-18001751FSHWTYEYTR1761GELLVLDLQG1771VGENLTDPSV1781IKAEEKRSCD1791MVFGPANLGE
1801-18501801DAIKNFRAKH1811HCNSCCRKLK1821LPDLKRNDYT1831PDKIIFPQDE1841PSDLNLQPGN
1851-18651851STKESESTNS1861VRLML
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 16 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.42
|
|
| 29 | - | - | - |
Deep-Palm: 0.16
|
|
| 33 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.39
|
|
| 36 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.20
|
|
| 42 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.13
|
|
| 44 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.37
|
|
| 53 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.78
|
|
| 200 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.80
|
|
| 315 | - | - | - |
Deep-Palm: 0.92
|
|
| 371 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.62
|
|
| 526 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.87
|
|
| 630 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.70
|
|
| 656 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.78
|
|
| 721 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.91
|
|
| 738 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.64
|
|
| 966 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.05
|
|
| 1056 | - | - | - |
Deep-Palm: 0.03
|
|
| 1066 | - | - | - |
Deep-Palm: 0.40
|
|
| 1143 | SWISSPALM | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.98
|
| 1144 | SWISSPALM | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.97
|
| 1146 | SWISSPALM | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.96
|
| 1177 | - | - | - |
Deep-Palm: 0.12
|
|
| 1208 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.48
|
|
| 1315 | - | - | - |
Deep-Palm: 0.21
|
|
| 1327 | - | - | - |
Deep-Palm: 0.13
|
|
| 1411 | - | - | - |
Deep-Palm: 0.46
|
|
| 1426 | - | - | - |
Deep-Palm: 0.70
|
|
| 1484 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.88
|
|
| 1608 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.85
|
|
| 1631 | - | - | - |
Deep-Palm: 0.93
|
|
| 1671 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.78
|
|
| 1710 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.44
|
|
| 1722 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.04
|
|
| 1789 | - | - | - |
Deep-Palm: 0.86
|
|
| 1812 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.75
|
|
| 1815 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.28
|
|
| 1816 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.28
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
LNCaP
Specificity: 1.000
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 71 | F → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 113 | Y → C | 0.001969 | SNP | Missense Mutation | HNSC |
| 170 | W → C | 0.002506 | SNP | Missense Mutation | COAD |
| 310 | V → Cfs*7 | 0.002506 | INS | Frame Shift Ins | COAD |
| 526 | C → C | 0.001969 | SNP | Silent | HNSC |
| 526 | C → Y | 0.001969 | SNP | Missense Mutation | HNSC |
| 539 | S → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 645 | G → C | 0.003559 | SNP | Missense Mutation | KIRP |
| 645 | G → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 683 | S → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 972 | W → C | 0.010870 | SNP | Missense Mutation | ACC |
| 975 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 975 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1002 | Y → C | 0.002976 | SNP | Missense Mutation | KIRC |
| 1115 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1198 | R → C | 0.002545 | SNP | Missense Mutation | GBM |
| 1198 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1217 | R → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 1217 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1351 | S → Cfs*32 | 0.002033 | INS | Frame Shift Ins | THCA |
| 1427 | S → C | 0.002294 | SNP | Missense Mutation | OV |
| 1463 | S → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 1484 | C → C | 0.002288 | SNP | Silent | STAD |
| 1555 | Y → C | 0.001969 | SNP | Missense Mutation | HNSC |
| 1586 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 1631 | C → S | 0.002288 | SNP | Missense Mutation | STAD |
| 1662 | Y → C | 0.005435 | SNP | Missense Mutation | ESCA |
| 1862 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 1862 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 1862 | R → C | 0.014599 | SNP | Missense Mutation | READ |
| 1862 | R → C | 0.003774 | SNP | Missense Mutation | UCEC |