Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q96S55 | WRNIP1 | ATPase WRNIP1 (EC 3.6.1.-) (Werner … | Homo sapiens (Human) | 665 aa |
Protein Details: Q96S55 (WRNIP1)
Protein Information
| Accession | Q96S55 |
|---|---|
| Protein Names | ATPase WRNIP1 (EC 3.6.1.-) (Werner helicase-interacting protein 1) |
| Gene Symbol | WRNIP1 |
| Organism | Homo sapiens (Human) |
| Length | 665 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31382980 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEVSGPEDDP11FLSQLHQVQC21PVCQQMMPAA31HINSHLDRCL41LLHPAGHAEP
51-10051AAGSHRAGER61AKGPSPPGAK71RRRLSESSAL81KQPATPTAAE91SSEGEGEEGD
101-150101DGGETESRES111YDAPPTPSGA121RLIPDFPVAR131SSSPGRKGSG141KRPAAAAAAG
151-200151SASPRSWDEA161EAQEEEEAVG171DGDGDGDADA181DGEDDPGHWD191ADAAEAATAF
201-250201GASGGGRPHP211RALAAEEIRQ221MLQGKPLADT231MRPDTLQDYF241GQSKAVGQDT
251-300251LLRSLLETNE261IPSLILWGPP271GCGKTTLAHI281IASNSKKHSI291RFVTLSATNA
301-350301KTNDVRDVIK311QAQNEKSFFK321RKTILFIDEI331HRFNKSQQDT341FLPHVECGTI
351-400351TLIGATTENP361SFQVNAALLS371RCRVIVLEKL381PVEAMVTILM391RAINSLGIHV
401-450401LDSSRPTDPL411SHSSNSSSEP421AMFIEDKAVD431TLAYLSDGDA441RAGLNGLQLA
451-500451VLARLSSRKM461FCKKSGQSYS471PSRVLITEND481VKEGLQRSHI491LYDRAGEEHY
501-550501NCISALHKSM511RGSDQNASLY521WLARMLEGGE531DPLYVARRLV541RFASEDIGLA
551-600551DPSALTQAVA561AYQGCHFIGM571PECEVLLAQC581VVYFARAPKS591IEVYSAYNNV
601-650601KACLRNHQGP611LPPVPLHLRN621APTRLMKDLG631YGKGYKYNPM641YSEPVDQEYL
651-665651PEELRGVDFF661KQRRC
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 20 | Rad18, zinc finger UBZ4-type WRNIP1, ubiquitin-binding domain Classic Zinc Finger | - | - |
Deep-Palm: 0.04
|
|
| 23 | Classic Zinc Finger WRNIP1, ubiquitin-binding domain Rad18, zinc finger UBZ4-type | - | - |
Deep-Palm: 0.04
|
|
| 39 | - | - | - |
Deep-Palm: 0.67
|
|
| 272 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.97
|
|
| 347 | - | - | - |
Deep-Palm: 0.53
|
|
| 372 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.96
|
|
| 462 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.98
|
|
| 502 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.39
|
|
| 565 | - | - | - |
Deep-Palm: 0.85
|
|
| 573 | - | - | - |
Deep-Palm: 0.60
|
|
| 580 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.32
|
|
| 603 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.91
|
|
| 665 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
U937 cell
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 580 | C → R | 0.002288 | SNP | Missense Mutation | STAD |
| 594 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 614 | V → Cfs*5 | 0.002288 | DEL | Frame Shift Del | STAD |
| 665 | C → C | 0.001887 | SNP | Silent | UCEC |