Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q99JI4 | Psmd6 | 26S proteasome non-ATPase regulatory subunit … | Mus musculus (Mouse) | 389 aa |
Protein Details: Q99JI4 (Psmd6)
Protein Information
| Accession | Q99JI4 |
|---|---|
| Protein Names | 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory subunit RPN7) (26S proteasome regulatory subunit S10) (p42A) |
| Gene Symbol | Psmd6 |
| Organism | Mus musculus (Mouse) |
| Length | 389 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34884899 35477839 37925639 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPLENLEEEG11LPKNPDLRIA21QLRFLLSLPE31HRGDAAVREE41LMAAVRENNM
51-10051APYYEALCKS61LDWQMDVDLL71SKMKKANEEE81LKRLDEELED91AEKNLGESEI
101-150101RDAMMAKAEY111LCQIGDKEGA121LTAFRKTYDK131TVALGHRLDI141VFYLLRIGLF
151-200151YMDNDLITRN161TEKAKSLIEE171GGDWDRRNRL181KVYQGLYCVA191IRDFKQAAEL
201-250201FLDTVSTFTS211YELMDYKTFV221TYTVYVSMIA231LERPDLREKV241IKGAEILEVL
251-300251HSLPAVRQYL261FSLYECRYSV271FFQSLAIVEQ281EMKKDWLFAP291HYRYYVREMR
301-350301IHAYSQLLES311YRSLTLGYMA321EAFGVGVDFI331DQELSRFIAA341GRLHCKIDKV
351-389351NEIVETNRPD361SKNWQYQETI371KKGDLLLNRV381QKLSRVINM
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 58 | - | - | - |
Deep-Palm: 0.42
|
|
| 112 | - | - | - |
Deep-Palm: 0.95
|
|
| 188 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.94
|
|
| 266 | - | - | - |
Deep-Palm: 0.74
|
|
| 345 | - | - | - |
Deep-Palm: 0.93
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
4
Liver
Specificity: 0.667
4/4 (100.0%)
2
Testis
Specificity: 0.333
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.