Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q99K95 | Rtf2 | Replication termination factor 2 (RTF2) … | Mus musculus (Mouse) | 307 aa |
Protein Details: Q99K95 (Rtf2)
Protein Information
| Accession | Q99K95 |
|---|---|
| Protein Names | Replication termination factor 2 (RTF2) (Replication termination factor 2 domain-containing protein 1) |
| Gene Symbol | Rtf2 |
| Organism | Mus musculus (Mouse) |
| Length | 307 aa |
| Isoforms | No isoforms |
| Related PMIDs | 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGCDGGTIPK11RHELVKGPKK21VEKVDKDAEL31VAQWNYCTLS41QEILRRPIVA
51-10051CELGRLYNKD61AVIEFLLDKS71AEKALGKAAS81HIRSIKNVTE91LRLSDNPAWE
101-150101GDKGNTKGDK111HDDLQRARFI121CPVVGLEMNG131RHRFCFLRCC141GCVFSERALK
151-200151EIKAEVCHTC161GAAFQEEDII171VLNGTKEDVE181MLKKRMEERR191LRAKLEKKTK
201-250201KPKTATECAS211KPGTTQDSAG221PSKVKSGKPE231EADPDPREKK241STPAPRGAAT
251-300251NGSASGKVGK261PPCGALKRSI271ADSEESETYK281SIFTSHSSAK291RSKEESAHWV
301-307301THTSYCF
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 3 | Rtf2 RING-finger | - | - |
GPS-Palm: 0.98
Deep-Palm: 0.02
|
|
| 37 | Replication termination factor 2 Rtf2 RING-finger | - | - |
Deep-Palm: 0.88
|
|
| 51 | SWISSPALM DBPTM CYSMODDB | Rtf2 RING-finger |
liver
(26165157)
| - |
GPS-Palm: 0.95
Deep-Palm: 0.96
|
| 121 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.67
|
|
| 135 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.91
|
|
| 139 | - | - | - |
Deep-Palm: 0.93
|
|
| 140 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.93
|
|
| 142 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.91
|
|
| 157 | - | - | - |
Deep-Palm: 0.88
|
|
| 160 | - | - | - |
Deep-Palm: 0.77
|
|
| 208 | - | - | - |
Deep-Palm: 0.92
|
|
| 263 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.96
|
|
| 306 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Liver
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.