Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q99L48 | Nmd3 | 60S ribosomal export protein NMD3 | Mus musculus (Mouse) | 503 aa |
Protein Details: Q99L48 (Nmd3)
Protein Information
| Accession | Q99L48 |
|---|---|
| Protein Names | 60S ribosomal export protein NMD3 |
| Gene Symbol | Nmd3 |
| Organism | Mus musculus (Mouse) |
| Length | 503 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 35477839 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEYMAESIEH11SPGHILCCEC21GVPISPNPAN31ICVACLRSKV41DISQGVPKQV
51-10051SISFCKQCQR61YFQPPASWVQ71CALESRELLA81LCLKKIKAPL91SKVRLVDAGF
101-150101VWTEPHSKRL111KVKLTIQKEV121MNGAILQQVF131VVDYVVQSQM141CGDCHRVEAK
151-200151DFWKAVIQVR161QKTLHKKTFY171YLEQLILKYG181MHQNTLRIKE191IHDGLDFYYS
201-250201SKQHAQKMVE211FLQGIVPCRY221KASQRLISQD231IHSNTYNYKS241TFSVEIVPIC
251-300251KDNVVCLSPK261LAQSLGNMSQ271ICICIRVTSA281IHLIDPNTLQ291VADIDGNTFW
301-350301SHPFNSLCHP311KQLEEFIVIE321CSTVRDLKRS331AGAGVISKKH341TLGEVWIQKT
351-400351SEMNTDKQYF361CRTHLGHLLN371PGDLVLGFDL381ANCNLNDEYV391NKMNSDRVPD
401-450401VVLIKKSYDR411TKRQRRRNWK421LKELARDREN431MDTDDERQYQ441DFLEDLEEDE
451-500451AIRKHVNIYR461DATIPVESDT471DDEGAPRISL481AEMLEDLHIS491QDATGEEGAS
501-503501MMS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 17 | - | - | - |
Deep-Palm: 0.06
|
|
| 18 | - | - | - |
Deep-Palm: 0.06
|
|
| 20 | Ribosomal export protein Nmd3 | - | - |
Deep-Palm: 0.08
|
|
| 32 | Nmd3, N-terminal Ribosomal export protein Nmd3 | - | - |
Deep-Palm: 0.87
|
|
| 35 | Nmd3, N-terminal Ribosomal export protein Nmd3 | - | - |
Deep-Palm: 0.88
|
|
| 55 | - | - | - |
Deep-Palm: 0.20
|
|
| 58 | - | - | - |
Deep-Palm: 0.24
|
|
| 71 | - | - | - |
Deep-Palm: 0.96
|
|
| 82 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.98
|
|
| 141 | - | - | - |
Deep-Palm: 0.15
|
|
| 144 | - | - | - |
Deep-Palm: 0.17
|
|
| 218 | SWISSPALM DBPTM CYSMODDB | NMD3 family |
Liver
(28526873)
| - |
GPS-Palm: 0.94
Deep-Palm: 0.82
|
| 250 | - | - | - |
Deep-Palm: 0.84
|
|
| 256 | - | - | - |
Deep-Palm: 0.88
|
|
| 272 | - | - | - |
Deep-Palm: 0.82
|
|
| 274 | - | - | - |
Deep-Palm: 0.60
|
|
| 308 | - | - | - |
Deep-Palm: 0.04
|
|
| 321 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.94
|
|
| 361 | - | - | - |
Deep-Palm: 0.46
|
|
| 383 | - | - | - |
Deep-Palm: 0.79
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Testis
Specificity: 0.667
2/2 (100.0%)
1
Liver
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.