Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q99LC3 | Ndufa10 | NADH dehydrogenase [ubiquinone] 1 alpha … | Mus musculus (Mouse) | 355 aa |
Protein Details: Q99LC3 (Ndufa10)
Protein Information
| Accession | Q99LC3 |
|---|---|
| Protein Names | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial (Complex I-42kD) (CI-42kD) (NADH-ubiquinone oxidoreductase 42 kDa subunit) |
| Gene Symbol | Ndufa10 |
| Organism | Mus musculus (Mouse) |
| Length | 355 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 31311849 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MALRLLRLVP11ASAPARGLAA21GAQRVGRIHT31SVHCKLRYGL41LAAILGDKTT
51-10051KKLHEYSRVI61TVDGNICSGK71NKLAKEIAQQ81LGMKHYPEAG91IQYSSTTTGD
101-150101GRPLDIEFSG111SCSLEKFYDD121PKSNDGNSYR131LQSWLYASRL141LQYADALEHL
151-200151LSTGQGVVLE161RSIYSDFVFL171EAMYNQGYIR181KQCVDHYNEI191KRLTLPEYLP
201-250201PHAVIYIDVP211VPEVQSRIQK221KGDPHEMKVT231SAYLQDIENA241YKKTFLPKMS
251-300251EMCEVLVYDS261WEAEDPTKVV271EDIEYLKYNK281GPWLKQDDWT291FHYLRMLVQD
301-350301KTEVLNYTTI311PVYLPEITIG321AHQGSRIYNS331FRELPGRKYA341PGYNAEVGDK
351-355351WIWLK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 34 | - | - | - |
Deep-Palm: 0.97
|
|
| 67 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
MLE
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.95
Deep-Palm: 0.95
|
| 112 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.79
|
|
| 183 | Deoxynucleoside kinase |
Brain
(31311849)
|
Brain
(31311849)
|
Deep-Palm: 0.19
|
|
| 253 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.63
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.462
6
Brain
Specificity: 0.122
6/6 (100.0%)
5
Liver
Specificity: 0.102
5/5 (100.0%)
2
Testis
Specificity: 0.041
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
36
Brain tissue (Mass)
Specificity: 0.735
36/56 (64.3%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.