Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q99LF4 | Rtcb; D10Wsu52e | RNA-splicing ligase RtcB homolog (EC … | Mus musculus (Mouse) | 505 aa |
Protein Details: Q99LF4 (Rtcb)
Protein Information
| Accession | Q99LF4 |
|---|---|
| Protein Names | RNA-splicing ligase RtcB homolog (EC 6.5.1.8) (3'-phosphate/5'-hydroxy nucleic acid ligase) (Focal adhesion-associated protein) (FAAP) |
| Gene Symbol | Rtcb; D10Wsu52e |
| Organism | Mus musculus (Mouse) |
| Length | 505 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 29733200 31772009 34884899 35477839 37925639 39008777 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.559
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
19
Liver tissue
Specificity: 0.559
19/19 (100.0%)
6
Liver membrane
Specificity: 0.176
6/6 (100.0%)
3
Brain tissue
Specificity: 0.088
3/12 (25.0%)
3
Neural Stem Cells
Specificity: 0.088
3/3 (100.0%)
2
Testis
Specificity: 0.059
2/2 (100.0%)
1
Macrophage Raw 264.7
Specificity: 0.029
1/2 (50.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MSRNYNDELQ11FLDKINKNCW21RIKKGFVPNM31QVEGVFYVND41ALEKLMFEEL
51-10051RNACRGGGVG61GFLPAMKQIG71NVAALPGIVH81RSIGLPDVHS91GYGFAIGNMA
101-150101AFDMNDPEAV111VSPGGVGFDI121NCGVRLLRTN131LDESDVQPVK141EQLAQAMFDH
151-200151IPVGVGSKGV161IPMNAKDLEE171ALEMGVDWSL181REGYAWAEDK191EHCEEYGRML
201-250201QADPNKVSPR211AKKRGLPQLG221TLGAGNHYAE231IQVVDEIFNE241YAAKKMGIDH
251-300251KGQVCVMIHS261GSRGLGHQVA271TDALVAMEKA281MKRDKIIVND291RQLACARIAS
301-350301PEGQDYLKGM311AAAGNYAWVN321RSSMTFLTRQ331AFAKVFNTTP341DDLDLHVIYD
351-400351VSHNIAKVEQ361HVVDGKERTL371LVHRKGSTRA381FPPHHPLIAV391DYQLTGQPVL
401-450401IGGTMGTCSY411VLTGTEQGMT421ETFGTTCHGA431GRALSRAKSR441RNLDFQDVLD
451-500451KLADMGIAIR461VASPKLVMEE471APESYKNVTD481VVNTCHDAGI491SKKAIKLRPI
501-505501AVIKG