Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q99LH2 | Ptdss1 | Phosphatidylserine synthase 1 (PSS-1) (PtdSer … | Mus musculus (Mouse) | 473 aa |
Protein Details: Q99LH2 (Ptdss1)
Protein Information
| Accession | Q99LH2 |
|---|---|
| Protein Names | Phosphatidylserine synthase 1 (PSS-1) (PtdSer synthase 1) (EC 2.7.8.29) (Serine-exchange enzyme I) |
| Gene Symbol | Ptdss1 |
| Organism | Mus musculus (Mouse) |
| Length | 473 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASCVGSRTL11SKDDVNYRMH21FRMINEQQVE31DITIDFFYRP41HTITLLSFTI
51-10051ISLMYFAFTR61DDSVPEDNIW71RGILSVIFFF81LIISVLAFPN91GPFTRPHPAL
101-150101WRMVFGLSVL111YFLFLVFLLF121LNFEQVKSLM131YWLDPNLRYA141TREADIMEYA
151-200151VNCHVITWER161IVSHFDIFAF171GHFWGWAMKA181LLIRSYGLCW191TISITWELTE
201-250201LFFMHLLPNF211AECWWDQVIL221DILLCNGGGI231WLGMVVCRFL241EMRTYHWASF
251-300251KDIHTTTGKI261KRAVLQFTPA271SWTYVRWFDP281KSSFQRVAGI291YLFMIIWQLT
301-350301ELNTFFLKHI311FVFQASHPLS321WGRILFIGCI331TAPTVRQYYA341YLTDTQCKRV
351-400351GTQCWVFGVI361GFLEAIVCIK371FGQDLFSKTQ381ILYVMLWLLC391VAFTTFLCLY
401-450401GMVWYAEHYG411HREKTYSECE421DGTYSPEISW431HHGKGSKGSE441DSPPKHSSNH
451-473451ESHSSRRRNR461HSKSKVTNGV471GKK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 4 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.03
|
|
| 153 | - | - | - |
Deep-Palm: 0.05
|
|
| 189 | - | - | - |
Deep-Palm: 0.29
|
|
| 213 | - | - | - |
Deep-Palm: 0.07
|
|
| 225 | - | - | - |
Deep-Palm: 0.06
|
|
| 237 | - | - | - |
Deep-Palm: 0.37
|
|
| 329 | SWISSPALM DBPTM CYSMODDB | Phosphatidyl serine synthase |
Liver
(28526873)
| - |
GPS-Palm: 0.95
Deep-Palm: 0.72
|
| 347 | - | - | - |
Deep-Palm: 0.26
|
|
| 354 | - | - | - |
Deep-Palm: 0.18
|
|
| 368 | - | - | - |
Deep-Palm: 0.38
|
|
| 390 | - | - | - |
Deep-Palm: 0.09
|
|
| 398 | - | - | - |
Deep-Palm: 0.06
|
|
| 419 | - | - | - |
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Liver
Specificity: 0.400
2/2 (100.0%)
1
Brain
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Liver tissue (Mass)
Specificity: 0.400
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.