Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q99NF1 | Bco2 | Carotenoid-cleaving dioxygenase, mitochondrial (EC 1.13.11.-) … | Mus musculus (Mouse) | 532 aa |
Protein Details: Q99NF1 (Bco2)
Protein Information
| Accession | Q99NF1 |
|---|---|
| Protein Names | Carotenoid-cleaving dioxygenase, mitochondrial (EC 1.13.11.-) (EC 1.13.11.71) (B-diox-II) (Beta,beta-carotene 9',10'-oxygenase) (Beta-carotene dioxygenase 2) |
| Gene Symbol | Bco2 |
| Organism | Mus musculus (Mouse) |
| Length | 532 aa |
| Isoforms | No isoforms |
| Related PMIDs | 37925639 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLGPKQSLPC11IAPLLTTAEE21TLSAVSARVR31GHIPEWLNGY41LLRVGPGKFE
51-10051FGKDRYNHWF61DGMALLHQFR71MERGTVTYKS81KFLQSDTYKA91NSAGGRIVIS
101-150101EFGTLALPDP111CKSIFERFMS121RFEPPTMTDN131TNVNFVQYKG141DYYMSTETNF
151-200151MNKVDIEMLE161RTEKVDWSKF171IAVNGATAHP181HYDPDGTAYN191MGNSYGPRGS
201-250201CYNIIRVPPK211KKEPGETIHG221AQVLCSIAST231EKMKPSYYHS241FGMTKNYIIF
251-300251VEQPVKMKLW261KIITSKIRGK271PFADGISWEP281QYNTRFHVVD291KHTGQLLPGM
301-350301YYSMPFLTYH311QINAFEDQGC321IVIDLCCQDD331GRSLDLYQLQ341NLRKAGEGLD
351-400351QVYELKAKSF361PRRFVLPLDV371SVDAAEGKNL381SPLSYSSASA391VKQGDGEIWC
401-450401SPENLHHEDL411EEEGGIEFPQ421INYGRFNGKK431YSFFYGCGFR441HLVGDSLIKV
451-500451DVTNKTLRVW461REEGFYPSEP471VFVPVPGADE481EDSGVILSVV491ITPNQSESNF
501-532501LLVLDAKSFT511ELGRAEVPVQ521MPYGFHGTFV531PI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 10 | - | - | - |
Deep-Palm: 0.21
|
|
| 111 | SWISSPALM | - | - | - |
Deep-Palm: 0.96
|
| 201 | - | - | - |
Deep-Palm: 0.47
|
|
| 225 | - | - | - |
Deep-Palm: 0.80
|
|
| 320 | - | - | - |
Deep-Palm: 0.15
|
|
| 326 | - | - | - |
Deep-Palm: 0.20
|
|
| 327 | - | - | - |
Deep-Palm: 0.27
|
|
| 400 | - | - | - |
Deep-Palm: 0.71
|
|
| 437 | - | - | - |
Deep-Palm: 0.88
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Liver
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.