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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
Q9BTT6-2 LRRC1 Isoform 2 of Leucine-rich repeat-containing … Homo sapiens (Human) 197 aa

Protein Details: Q9BTT6-2 (LRRC1)

Protein Information
Accession Q9BTT6-2
Protein Names Isoform 2 of Leucine-rich repeat-containing protein 1
Gene Symbol LRRC1
Organism Homo sapiens (Human)
Length 197 aa
Isoforms
Related PMIDs 19801377 29575903 31251020 32651440 32944167
Database Sources No database sources
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.822
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
37
LNCaP cells
Specificity: 0.822
37/46 (80.4%)
4
PC3 cells
Specificity: 0.089
4/4 (100.0%)
2
DU145 cells
Specificity: 0.044
2/2 (100.0%)
1
Jurkat T cells
Specificity: 0.022
1/25 (4.0%)
1
HeLa cells
Specificity: 0.022
1/1 (100.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MFHCIPLWRC11NRHVESIDKR21HCSLVYVPEE31IYRYARSLEE41LLLDANQLRE
51-10051LPEQFFQLVK61LRKLGLSDNE71IQRLPPEIAN81FMQLVELDVS91RNEIPEIPES
101-150101ISFCKALQVA111DFSGNPLTRL121PESFPELQNL131TCLSVNDISL141QSLPENIGNL
151-197151YNLASLELRE161NLLTYLPDSL171TQLRRLEELD181LGNNEIYNLN191QLEPSYI
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
4 Prediction (High) - -
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
34 Y → C 0.002033 SNP Missense Mutation LUSC
341 C → R 0.002033 SNP Missense Mutation LUSC
431 R → C 0.001887 SNP Missense Mutation UCEC