Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9CPX6 | Atg3 | Ubiquitin-like-conjugating enzyme ATG3 (EC 2.3.2.-) … | Mus musculus (Mouse) | 314 aa |
Protein Details: Q9CPX6 (Atg3)
Protein Information
| Accession | Q9CPX6 |
|---|---|
| Protein Names | Ubiquitin-like-conjugating enzyme ATG3 (EC 2.3.2.-) (Autophagy-related protein 3) (APG3-like) |
| Gene Symbol | Atg3 |
| Organism | Mus musculus (Mouse) |
| Length | 314 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34884899 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MQNVINTVKG11KALEVAEYLT21PVLKESKFKE31TGVITPEEFV41AAGDHLVHHC
51-10051PTWQWATGEE61LKVKAYLPTD71KQFLVTKNVP81CYKRCKQMEY91SDELEAIIEE
101-150101DDGDGGWVDT111YHNTGITGIT121EAVKEITLES131KDSIKLQDCS141ALCDEEDEED
151-200151EGEAADMEEY161EESGLLETDE171ATLDTRKIVE181ACKAKADAGG191EDAILQTRTY
201-250201DLYITYDKYY211QTPRLWLFGY221DEQRQPLTVE231HMYEDISQDH241VKKTVTIENH
251-300251PHLPPPPMCS261VHPCRHAEVM271KKIIETVAEG281GGELGVHMYL291LIFLKFVQAV
301-314301IPTIEYDYTR311HFTM
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 50 | UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 Ubiquitin-like-conjugating enzyme Atg3/Atg10 | - | - |
Deep-Palm: 0.86
|
|
| 81 | - | - | - |
Deep-Palm: 0.31
|
|
| 85 | - | - | - |
Deep-Palm: 0.36
|
|
| 139 | - | - | - |
Deep-Palm: 0.87
|
|
| 143 | - | - | - |
Deep-Palm: 0.81
|
|
| 182 | - | - | - |
Deep-Palm: 0.98
|
|
| 259 | SWISSPALM DBPTM CYSMODDB | Autophagocytosis associated protein active-site domain |
Forebrain
(28680068)
| - |
Deep-Palm: 0.17
|
| 264 | SWISSPALM DBPTM CYSMODDB | Autophagocytosis associated protein active-site domain |
Forebrain
(28680068)
| - |
Deep-Palm: 0.24
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
4
Liver
Specificity: 0.667
4/4 (100.0%)
2
Testis
Specificity: 0.333
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.